RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RPS17P08708 135 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 KRT10P13645 584 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LCP1P13796 627 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CD58P19256 250 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PTPN6P29350 595 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GARSP41250 739 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 HSPA13P48723 471 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SERPINB8P50452 374 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 NDST1P52848 882 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SH3BGRP55822 239 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 FAM110CQ1W6H9 321 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 HKDC1Q2TB90 917 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RIPOR1Q6ZS17 1223 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 EP400NLQ6ZTU2 488 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 FRMD7Q6ZUT3 714 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 DHDDSQ86SQ9 333 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LONP2Q86WA8 852 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC6Q86X45 466 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PALM2Q8IXS6 379 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC185Q8N715 623 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 NPWQ8N729 165 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RIN3Q8TB24 985 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GDPD5Q8WTR4 605 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 C2orf15Q8WU43 125 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 HTR3CQ8WXA8 447 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SLC45A3Q96JT2 553 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MYRFLQ96LU7 910 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PCMTD1Q96MG8 357 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM62Q9BVG3 475 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MRPS26Q9BYN8 205 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 P2RY12Q9H244 342 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MFSD1Q9H3U5 465 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CRTAC1Q9NQ79 661 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SETD4Q9NVD3 440 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SEPT9Q9UHD8 586 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CDH9Q9ULB4 789 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PPT2Q9UMR5 302 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SCML2Q9UQR0 700 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 COMMD10Q9Y6G5 202 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 EXPH5Q8NEV8 1989 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 IGLV3-16A0A075B6K0 115 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 DPPA5A6NC42 116 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA8IPA6NC78 632 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA8JA6NMD2 632 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 STX16-NPEPL1H3BU86 382 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 STX16O14662 325 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 HRO43593 1189 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ITM2AO43736 263 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 BAIAP3O94812 1187 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RTN3O95197 1032 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 FKBP9O95302 570 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CALCAP01258 141 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LYNP07948 512 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 P4HA1P13674 534 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 DDX5P17844 614 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TFE3P19532 575 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 EPHB2P29323 1055 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SSTR1P30872 391 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GP5P40197 560 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 NRIP1P48552 1158 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GABARAPL2P60520 117 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ATP6V0D1P61421 351 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MYBPC1Q00872 1141 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SOX4Q06945 474 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM132DQ14C87 1099 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GGTA1PQ4G0N0 100 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SH3PXD2AQ5TCZ1 1133 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LIPMQ5VYY2 423 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LILRA2Q8N149 483 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TDRD5Q8NAT2 981 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ARRDC4Q8NCT1 418 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TTC8Q8TAM2 541 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF420Q8TAQ5 688 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ARRDC2Q8TBH0 407 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 VWCEQ96DN2 955 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 METTL2AQ96IZ6 378 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 FCRL2Q96LA5 508 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 DCBLD2Q96PD2 775 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ASB2Q96Q27 587 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LYSMD1Q96S90 227 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SMOQ99835 787 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ACBD6Q9BR61 282 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM55Q9BYV6 548 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RHOBTB2Q9BYZ6 727 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RHOJQ9H4E5 214 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 AGPAT4Q9NRZ5 378 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 STOML1Q9UBI4 398 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ZFP69BQ9UJL9 534 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 UBQLN1Q9UMX0 589 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SUFUQ9UMX1 484 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ERVW-1Q9UQF0 538 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 INPP5FQ9Y2H2 1132 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 GIT1Q9Y2X7 761 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RNF11Q9Y3C5 154 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 DOCK3Q8IZD9 2030 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 KANSL1LA0AUZ9 987 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PRR19A6NJB7 356 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms