RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 HAS1Q92839 578 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 EXOC4Q96A65 974 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ZFYVE19Q96K21 471 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 CCDC43Q96MW1 224 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 POLR3FQ9H1D9 316 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 PDZD7Q9H5P4 517 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 SLC38A7Q9NVC3 462 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 MAGEL2Q9UJ55 1249 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 TUBD1Q9UJT1 453 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ASB3Q9Y575 518 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 PCDHB6Q9Y5E3 794 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 A0A0A6YYK5 440 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 NPEPPSL1A6NEC2 478 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 PATE3B3GLJ2 98 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 PODXLO00592 558 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 NDUFS2O75306 463 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 OAZ2O95190 189 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 DEXIO95424 95 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 APBB3O95704 486 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 IL33O95760 270 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 PRKCBP05771 671 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 ZNF20P17024 532 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 ADCY8P40145 1251 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 ETV4P43268 484 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 RARRES1P49788 294 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 CCT2P78371 535 aaKnown RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 IRX4P78413 519 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 SIM1P81133 766 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 LMAN2Q12907 356 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 RUNX3Q13761 415 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 USP10Q14694 798 aaKnown RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 MLC1Q15049 377 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 EIF4HQ15056 248 aaKnown RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 WDR72Q3MJ13 1102 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 TRIM68Q6AZZ1 485 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 ALKAL1Q6UXT8 129 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 GAREM2Q75VX8 874 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 DNAJB7Q7Z6W7 309 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 TMC8Q8IU68 726 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 BCL6BQ8N143 479 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 MCPH1Q8NEM0 835 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 OR5AN1Q8NGI8 311 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 CCDC26Q8TAB7 109 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 C8orf49Q96NF6 230 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 EIF2AK1Q9BQI3 630 aaKnown RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 SOX7Q9BT81 388 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 HAPLN2Q9GZV7 340 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 TASP1Q9H6P5 420 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 SEC61A2Q9H9S3 476 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 GKN1Q9NS71 199 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 ST6GALNAC2Q9UJ37 374 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 KLK13Q9UKR3 277 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 PNMA8BQ9ULN7 279 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-228ENST00000554592 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
ATXN3-228ENST00000554592 A0A087WWV3 80 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 SPAARA0A1B0GVQ0 90 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 C1QTNF3-AMACRE9PGA6 284 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 MATN2O00339 956 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 USO1O60763 962 aaKnown RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 EGFP01133 1207 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 KCNE1P15382 129 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 PDIA3P30101 505 aaKnown RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 DPP6P42658 865 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 MCM2P49736 904 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 DGKEP52429 567 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 EFNA5P52803 228 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 SLC5A3P53794 718 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 EVCP57679 992 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 SCAPQ12770 1279 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 SEMA3BQ13214 749 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 GPR17Q13304 367 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 HNRNPDQ14103 355 aaKnown RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 SPIDRQ14159 915 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 DMC1Q14565 340 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 CDSNQ15517 529 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 NPY5RQ15761 445 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 TBR1Q16650 682 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 COL28A1Q2UY09 1125 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 ATF7IP2Q5U623 682 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 MBNL2Q5VZF2 373 aaKnown RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 PMS2CLQ68D20 193 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 TMEM200BQ69YZ2 307 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 GRAMD4Q6IC98 578 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 CENPPQ6IPU0 288 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 BLOC1S2Q6QNY1 142 aa5.24□□□□□ -1.57
ATXN3-228ENST00000554592 LARP4Q71RC2 724 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 EPM2AIP1Q7L775 607 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-228ENST00000554592 PIP4P1Q86T03 277 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms