RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RETSATQ6NUM9 610 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 SCYL2Q6P3W7 929 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 Q6ZVU0 165 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 NLRP14Q86W24 1093 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 OR7D4Q8NG98 312 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 GANCQ8TET4 914 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ZNF653Q96CK0 615 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 EIF3CQ99613 913 aaKnown RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ATP13A1Q9HD20 1204 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 MRPL47Q9HD33 250 aaKnown RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 CNOT8Q9UFF9 292 aaKnown RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ADAMTS1Q9UHI8 967 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 LAMA1P25391 3075 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 ASCC3Q8N3C0 2202 aaKnown RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 A0A1B0GTW7 788 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 A0A1W2PP55 124 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 TMEM191CA6NGB0 347 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 C1QTNF3-AMACRE9PGA6 284 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FAM72CH0Y354 149 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 CBX4O00257 560 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 RNASEH2AO75792 299 aaKnown RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 IL1BP01584 269 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 HTR7P34969 479 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 SERPINH1P50454 418 aaKnown RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 SLC20A2Q08357 652 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 TRIM14Q14142 442 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FAM72AQ5TYM5 149 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FAM46CQ5VWP2 391 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 DAB2IPQ5VWQ8 1189 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FAM72DQ6L9T8 149 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 C22orf39Q6P5X5 142 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FAM72BQ86X60 149 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 ZCCHC9Q8N567 271 aaKnown RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 ATP11CQ8NB49 1132 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 EPAS1Q99814 870 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 OMDQ99983 421 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 CEP44Q9C0F1 390 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 C6orf106Q9H6K1 298 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 SERGEFQ9UGK8 458 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 TPX2Q9ULW0 747 aaKnown RBP13.36□□□□□ -0.27
SHMT2-211ENST00000554310 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
SHMT2-211ENST00000554310 ADAMTS9Q9P2N4 1935 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 DCDC2BA2VCK2 349 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 CDX4O14627 284 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 MCF2LO15068 1137 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 FGF10O15520 208 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 SLC7A4O43246 635 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 RAMP2O60895 175 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 ZMPSTE24O75844 475 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 MT-CO1P00395 513 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 SYPP08247 313 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 GOT1P17174 413 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 EPHB2P29323 1055 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 CASP14P31944 242 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 ATXN3P54252 364 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 GEMIN4P57678 1058 aaKnown RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 SEMA3BQ13214 749 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 RTL3Q8N8U3 475 aaKnown RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 CPLX3Q8WVH0 158 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 SNX19Q92543 992 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 ACE2Q9BYF1 805 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 MIR1-1HGQ9H1L0 117 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 MAGEH1Q9H213 219 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 EIF2B4Q9UI10 523 aaKnown RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
SHMT2-211ENST00000554310 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-211ENST00000554310 K7ERQ8 282 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 TM4SF5O14894 197 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-211ENST00000554310 RNF8O76064 485 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 GLDCP23378 1020 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 MAOBP27338 520 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
SHMT2-211ENST00000554310 DRD3P35462 400 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 MAPK8P45983 427 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-211ENST00000554310 GALCP54803 685 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 ADPRHP54922 357 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 ARF5P84085 180 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 KIAA0895LQ68EN5 471 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 LINGO4Q6UY18 593 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 DNAAF5Q86Y56 855 aa13.34□□□□□ -0.27
SHMT2-211ENST00000554310 PSTKQ8IV42 348 aaKnown RBP13.34□□□□□ -0.27
SHMT2-211ENST00000554310 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms