RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ATP13A1Q9HD20 1204 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 ARFGAP3Q9NP61 516 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 RAB6BQ9NRW1 208 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 DUS2Q9NX74 493 aaKnown RBP7.81□□□□□ -1.16
TDP1-209ENST00000554180 GOLGA6AQ9NYA3 693 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 SEPT10Q9P0V9 454 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 KIAA1522Q9P206 1035 aaPredicted RBP7.81□□□□□ -1.16
TDP1-209ENST00000554180 KLHL8Q9P2G9 620 aaPredicted RBP7.81□□□□□ -1.16
TDP1-209ENST00000554180 CDH22Q9UJ99 828 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 ANAPC5Q9UJX4 755 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 VPS28Q9UK41 221 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 HPCAL4Q9UM19 191 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 USP15Q9Y4E8 981 aaPredicted RBP7.81□□□□□ -1.16
TDP1-209ENST00000554180 OR51B4Q9Y5P0 310 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 WNT6Q9Y6F9 365 aa7.81□□□□□ -1.16
TDP1-209ENST00000554180 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 NEDD8-MDP1E9PL57 170 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ZMPSTE24O75844 475 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ANXA9O76027 345 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 NEBLO76041 1014 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 SLC34A2O95436 690 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 JCHAINP01591 159 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 CYP17A1P05093 508 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ADH5P11766 374 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 TYRP14679 529 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PSMC3P17980 439 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ACVRL1P37023 503 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 CSKP41240 450 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 MMP13P45452 471 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 NRLP54845 237 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 GAD2Q05329 585 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 SULT2A1Q06520 285 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 CBLBQ13191 982 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 LBRQ14739 615 aaKnown RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 SLMAPQ14BN4 828 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 DHCR24Q15392 516 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 TRADDQ15628 312 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 SLC14A2Q15849 920 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PLEKHG6Q3KR16 790 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 INO80DQ53TQ3 878 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 MARC1Q5VT66 337 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 RNF219Q5W0B1 726 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 IL31Q6EBC2 164 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ALG1LQ6GMV1 187 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 RETSATQ6NUM9 610 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 VITQ6UXI7 678 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 B4GALNT4Q76KP1 1039 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PID1Q7Z2X4 250 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PRUNE1Q86TP1 453 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ZNF354CQ86Y25 554 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 TMEM25Q86YD3 366 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ZCCHC9Q8N567 271 aaKnown RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 NAT8LQ8N9F0 302 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 NETO2Q8NC67 525 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 MCUQ8NE86 351 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 OR7D4Q8NG98 312 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 OR52K2Q8NGK3 314 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 WFDC5Q8TCV5 224 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PRCCQ92733 491 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 ALG14Q96F25 216 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 LMLNQ96KR4 655 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 LRRC3BQ96PB8 259 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 PSKH2Q96QS6 385 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 XPO6Q96QU8 1125 aaKnown RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 NEUROG2Q9H2A3 272 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 LINC00597Q9H2U6 94 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 UBE2ZQ9H832 354 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 VPS45Q9NRW7 570 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 UBA2Q9UBT2 640 aaPredicted RBP7.8□□□□□ -1.16
TDP1-209ENST00000554180 SEPT3Q9UH03 358 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 ATP8A1Q9Y2Q0 1164 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 DENND4AQ7Z401 1863 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 DOCK8Q8NF50 2099 aa7.8□□□□□ -1.16
TDP1-209ENST00000554180 CHD5Q8TDI0 1954 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 E7EVH7 732 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ANHXE9PGG2 379 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 J3KR12 359 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 AP3B1O00203 1094 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CBX4O00257 560 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 EIF3HO15372 352 aaKnown RBP eCLIP7.79□□□□□ -1.16
TDP1-209ENST00000554180 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 PSMD3O43242 534 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 PPFIA2O75334 1257 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 SUN1O94901 812 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 METTL18O95568 372 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 AP2A1O95782 977 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 HLA-DQB2P05538 268 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 APRTP07741 180 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 PABPC1P11940 636 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 MLNP12872 115 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 FOSL2P15408 326 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 NFKB1P19838 968 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CES1P23141 567 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 PSMB4P28070 264 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 HLA-FP30511 346 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms