RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TMEM110Q86TL2 294 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 VPS36Q86VN1 386 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 LURAP1LQ8IV03 231 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SIX6OS1Q8N1H7 587 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 ZNF557Q8N988 423 aaPredicted RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 MSANTD4Q8NCY6 345 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 SLC20A1Q8WUM9 679 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 CPLX3Q8WVH0 158 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 IRGQQ8WZA9 623 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 AZIN2Q96A70 460 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 MRGPRX3Q96LB0 322 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 AGPAT1Q99943 283 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 HAUS4Q9H6D7 363 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 CPNE5Q9HCH3 593 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 OLA1Q9NTK5 396 aaKnown RBP7.97□□□□□ -1.13
ABCD4-220ENST00000553998 IMPACTQ9P2X3 320 aa7.97□□□□□ -1.13
ABCD4-220ENST00000553998 NYNRINQ9P2P1 1898 aaKnown RBP7.96□□□□□ -1.13
ABCD4-220ENST00000553998 A0A1W2PP55 124 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SSU72P8A0A1W2PR75 194 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 K7ENP7 123 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TULP2O00295 520 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TRIM38O00635 465 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 MAGEC1O60732 1142 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 RNASEH1O60930 286 aaKnown RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SIN3BO75182 1162 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ASLP04424 464 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 GP1BAP07359 652 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 CHRNB2P17787 502 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 POLR2EP19388 210 aaKnown RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TNFAIP3P21580 790 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 CD70P32970 193 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SCNN1AP37088 669 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 GABRB2P47870 512 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TKTL1P51854 596 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 NOMO3P69849 1222 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 CDK17Q00537 523 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 VAC14Q08AM6 782 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ADIGQ0VDE8 80 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 LY6DQ14210 128 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 CST6Q15828 149 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 CLEC16AQ2KHT3 1053 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TDRD12Q587J7 1177 aaKnown RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 PIK3R6Q5UE93 754 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 HGSNATQ68CP4 663 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 NAPEPLDQ6IQ20 393 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SND1Q7KZF4 910 aaKnown RBP eCLIP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 BEND5Q7L4P6 421 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ZNF571Q7Z3V5 609 aaPredicted RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ZDHHC17Q8IUH5 632 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 PASD1Q8IV76 773 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SLC25A45Q8N413 288 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 WDTC1Q8N5D0 677 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 C1orf131Q8NDD1 294 aaKnown RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 FIBINQ8TAL6 211 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 WFDC5Q8TCV5 224 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 SERAC1Q96JX3 654 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 TRIM62Q9BVG3 475 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ULBP1Q9BZM6 244 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 KDM4CQ9H3R0 1056 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 MTG2Q9H4K7 406 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 POLR1BQ9H9Y6 1135 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ASCL3Q9NQ33 180 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ST7Q9NRC1 585 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 AASDHPPTQ9NRN7 309 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ABHD10Q9NUJ1 306 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 ASNSD1Q9NWL6 643 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 INTS6Q9UL03 887 aaKnown RBP7.96□□□□□ -1.14
ABCD4-220ENST00000553998 PCDHB1Q9Y5F3 818 aa7.96□□□□□ -1.14
ABCD4-220ENST00000553998 FAM47DPA6NHR8 397 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 E5RJQ4 531 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 MID1O15344 667 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 IRAK2O43187 625 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 SIGLEC6O43699 453 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 OPA1O60313 960 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 RNASEH2AO75792 299 aaKnown RBP7.95□□□□□ -1.14
ABCD4-220ENST00000553998 GABBR2O75899 941 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 IGLV3-27P01718 113 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 GLI1P08151 1106 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 SRPRAP08240 638 aaKnown RBP7.95□□□□□ -1.14
ABCD4-220ENST00000553998 GIMD1P0DJR0 217 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 CKMT1AP12532 417 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 GZMAP12544 262 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 UNGP13051 313 aaPredicted RBP7.95□□□□□ -1.14
ABCD4-220ENST00000553998 C5AR1P21730 350 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 MMP8P22894 467 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 SLC8A1P32418 973 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 NSFP46459 744 aaKnown RBP7.95□□□□□ -1.14
ABCD4-220ENST00000553998 RGS7P49802 495 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 SGSHP51688 502 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 ADPRHP54922 357 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 DAOAP59103 153 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 ST8SIA6P61647 398 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 CENPCQ03188 943 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 MAPK8IP2Q13387 824 aaPredicted RBP7.95□□□□□ -1.14
ABCD4-220ENST00000553998 GSE1Q14687 1217 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 NUMA1Q14980 2115 aa7.95□□□□□ -1.14
ABCD4-220ENST00000553998 PTPN20Q4JDL3 420 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms