RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
PSMC6-204ENST00000553798 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
PSMC6-204ENST00000553798 ADGRG1Q9Y653 693 aa11.91□□□□□ -0.5
PSMC6-204ENST00000553798 C3orf70A6NLC5 250 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 K7ERQ8 282 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 ZNF217O75362 1048 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 RPP40O75818 363 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 CD48P09326 243 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 AMPD1P23109 780 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 NUMBP49757 651 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 RPS14P62263 151 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 CCZ1BP86790 482 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 KIF5AQ12840 1032 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 BYSLQ13895 437 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 KRT81Q14533 505 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 ELAVL3Q14576 367 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 INO80DQ53TQ3 878 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 LINGO4Q6UY18 593 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 KIAA1328Q86T90 577 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 C11orf74Q86VG3 221 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 NPWQ8N729 165 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 ATP11CQ8NB49 1132 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 CASKIN2Q8WXE0 1202 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 RAPGEF5Q92565 580 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 PRCCQ92733 491 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SIPA1Q96FS4 1042 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 ZC3H10Q96K80 434 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 DESI2Q9BSY9 194 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SLC39A8Q9C0K1 460 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
PSMC6-204ENST00000553798 SCML1Q9UN30 329 aa11.9□□□□□ -0.5
PSMC6-204ENST00000553798 GPR179Q6PRD1 2367 aa11.9□□□□□ -0.51
PSMC6-204ENST00000553798 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.51
PSMC6-204ENST00000553798 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ARHGAP42A6NI28 874 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 MCF2LO15068 1137 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ALOX15BO15296 676 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PSTPIP1O43586 416 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 SPOPO43791 374 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PRAMEF11O60813 436 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 VAV1P15498 845 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 KDELR1P24390 212 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PAPOLAP51003 745 aaKnown RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PAFAH1B3Q15102 231 aaKnown RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 TAZQ16635 292 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ZNF776Q68DI1 518 aaPredicted RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ZNF662Q6ZS27 426 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 DAAM2Q86T65 1068 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 LRRC49Q8IUZ0 686 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PGBD3Q8N328 593 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 LRRC57Q8N9N7 239 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 OR2A12Q8NGT7 310 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PCDH19Q8TAB3 1148 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PDLIM2Q96JY6 352 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PHOX2BQ99453 314 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 SLC6A17Q9H1V8 727 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PDFQ9HBH1 243 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ETNK2Q9NVF9 386 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 HYOU1Q9Y4L1 999 aa11.89□□□□□ -0.51
PSMC6-204ENST00000553798 ZFHX2Q9C0A1 2572 aaPredicted RBP11.89□□□□□ -0.51
PSMC6-204ENST00000553798 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 IGHV1OR15-9A0A0B4J2B8 117 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 BUB1O43683 1085 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 RNASEH1O60930 286 aaKnown RBP11.88□□□□□ -0.51
PSMC6-204ENST00000553798 SERPINB6P35237 376 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 GJC1P36383 396 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 TPMTP51580 245 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 SIM2Q14190 667 aaPredicted RBP11.88□□□□□ -0.51
PSMC6-204ENST00000553798 GSE1Q14687 1217 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
PSMC6-204ENST00000553798 SPDYCQ5MJ68 293 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 C22orf39Q6P5X5 142 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
PSMC6-204ENST00000553798 Q6ZVU0 165 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 DSG4Q86SJ6 1040 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 STK40Q8N2I9 435 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 PCDH20Q8N6Y1 951 aaKnown RBP11.88□□□□□ -0.51
PSMC6-204ENST00000553798 PQLC3Q8N755 202 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 UBE2Q2Q8WVN8 375 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 RLN3Q8WXF3 142 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 OR8D1Q8WZ84 308 aa11.88□□□□□ -0.51
PSMC6-204ENST00000553798 NKD2Q969F2 451 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms