RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 CMTM5Q96DZ9 223 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 AGAP3Q96P47 875 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 SORT1Q99523 831 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 GPR22Q99680 433 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 MLPHQ9BV36 600 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 MRM3Q9HC36 420 aaKnown RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 GPAMQ9HCL2 828 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 DONSONQ9NYP3 566 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 MARCOQ9UEW3 520 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 A0A096LPK6 155 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 F5H423 210 aaPredicted RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 TRIM13O60858 407 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 TYMPP19971 482 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 ALDH18A1P54886 795 aaKnown RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 MGAT3Q09327 533 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 ILF2Q12905 390 aaKnown RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 ZBTB17Q13105 803 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 RCN1Q15293 331 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 PCID2Q5JVF3 399 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 POTEHQ6S545 545 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 TAC4Q86UU9 113 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 CNTN4Q8IWV2 1026 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 URGCPQ8TCY9 931 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 RNF34Q969K3 372 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 FCRL5Q96RD9 977 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 PKMYT1Q99640 499 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 RHOJQ9H4E5 214 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.31
SHMT2-205ENST00000553474 PIH1D1Q9NWS0 290 aaKnown RBP13.15□□□□□ -0.31
SHMT2-205ENST00000553474 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 PRR5-ARHGAP8B1AHC4 643 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SLCO1B7G3V0H7 640 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SLC22A2O15244 555 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 IRAK2O43187 625 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ITM2AO43736 263 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 FKBP6O75344 327 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SCNN1GP51170 649 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 COPAP53621 1224 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ACTR3P61158 418 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 MRPS35P82673 323 aaKnown RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ARHGAP8P85298 464 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 TSPY1Q01534 308 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 KDSRQ06136 332 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ASPHQ12797 758 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 TUSC3Q13454 348 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 BLMHQ13867 455 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 RCN2Q14257 317 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 NAA25Q14CX7 972 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 MUM1Q2TAK8 710 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 HSP90AA5PQ58FG0 334 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ULK2Q8IYT8 1036 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 KLHDC9Q8NEP7 349 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 GABPB2Q8TAK5 448 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 DQX1Q8TE96 717 aaKnown RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ZNF778Q96MU6 729 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 EBF4Q9BQW3 602 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SMOC2Q9H3U7 446 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ZNF395Q9H8N7 513 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 NMRAL1Q9HBL8 299 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 ENTPD7Q9NQZ7 604 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 C20orf96Q9NUD7 363 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-205ENST00000553474 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
SHMT2-205ENST00000553474 MEIS3P2A8K0S8 358 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 H0Y3Z8 333 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 ZNF195O14628 629 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 INPPL1O15357 1258 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 SIN3BO75182 1162 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 B3GAT3O94766 335 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 JCHAINP01591 159 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 CHRNA1P02708 482 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 C2P06681 752 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-205ENST00000553474 CCR1P32246 355 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 IDH3AP50213 366 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 ACLYP53396 1101 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 GEMP55040 296 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 AP2B1P63010 937 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 IRX4P78413 519 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 PPM1JQ5JR12 505 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
SHMT2-205ENST00000553474 ADGRG6Q86SQ4 1221 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms