RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SHC2P98077 582 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 CYP4A11Q02928 519 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 BFSP1Q12934 665 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 RRP1BQ14684 758 aaKnown RBP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 BEAN1Q3B7T3 259 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 SLC10A5Q5PT55 438 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 FAM171A1Q5VUB5 890 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ADALQ6DHV7 355 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 KRT80Q6KB66 452 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 AADACL2Q6P093 401 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 VWA1Q6PCB0 445 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 RNF144BQ7Z419 303 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 CIR1Q86X95 450 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 SFTPA1Q8IWL2 248 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ADGRF3Q8IZF5 1079 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 CPEB3Q8NE35 698 aaKnown RBP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 DNAAF1Q8NEP3 725 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ABHD11Q8NFV4 315 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 GTF3C6Q969F1 213 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 FUBP1Q96AE4 644 aaKnown RBP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 LOXL4Q96JB6 756 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 GCNAQ96QF7 691 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 H2AFJQ9BTM1 129 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ADGRE3Q9BY15 652 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 CADM1Q9BY67 442 aaKnown RBP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ENTPD7Q9NQZ7 604 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 TBCCD1Q9NVR7 557 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 PPP4R1LQ9P1A2 415 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 DKK3Q9UBP4 350 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 HAO1Q9UJM8 370 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 A4GNTQ9UNA3 340 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 DHDHQ9UQ10 334 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 PKP3Q9Y446 797 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 CCL27Q9Y4X3 112 aa6.1□□□□□ -1.43
SCFD1-208ENST00000553278 ARHGAP10A1A4S6 786 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 OR6C68A6NDL8 312 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 TRIM64A6NGJ6 449 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 TRIM64BA6NI03 449 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 CDRT15L2A8MXV6 281 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 MCIDASD6RGH6 385 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 H0Y626 953 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 SCAMP1O15126 338 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 PROM1O43490 865 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 SEC31AO94979 1220 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ZFXP17010 805 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 NDUFS1P28331 727 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ATP5DP30049 168 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 STAT6P42226 847 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 GNAQP50148 359 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 BLKP51451 505 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ADPRHP54922 357 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 WDR5P61964 334 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FAM189BP81408 668 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 PCLAFQ15004 111 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ASIC2Q16515 512 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 GLE1Q53GS7 698 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 RABL3Q5HYI8 236 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 C9orf152Q5JTZ5 239 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 TSSK4Q6SA08 328 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 IL20RBQ6UXL0 311 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 USP51Q70EK9 711 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 CCDC186Q7Z3E2 898 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FAM160B2Q86V87 743 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 LINC00346Q8IVM7 164 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 CEP97Q8IW35 865 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 TDRD5Q8NAT2 981 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 APPL2Q8NEU8 664 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 VPS33AQ96AX1 596 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 EDC3Q96F86 508 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 GPR78Q96P69 363 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FYTTD1Q96QD9 318 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ABHD1Q96SE0 405 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 TRIM2Q9C040 744 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 XAB2Q9HCS7 855 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 SNTG1Q9NSN8 517 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 DLGAP2Q9P1A6 1054 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 UPB1Q9UBR1 384 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 ANAPC5Q9UJX4 755 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FZD4Q9ULV1 537 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 PPIEQ9UNP9 301 aaKnown RBP6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FRMD4BQ9Y2L6 1034 aa6.09□□□□□ -1.43
SCFD1-208ENST00000553278 FLT1P17948 1338 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 AOX1Q06278 1338 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 hCG_1809904A0A1W2PP81 198 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 A0A1W2PPE2 198 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 A0A1W2PQF6 199 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 A0A1W2PR64 198 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 CNTN5O94779 1100 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 TGDSO95455 350 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 MYBL1P10243 752 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ATP6V1B1P15313 513 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 GABRB1P18505 474 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ACO1P21399 889 aaKnown RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 SKIV2L2P42285 1042 aaKnown RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 GABRB2P47870 512 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 LIG4P49917 911 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms