RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	EPHA8	P29322	1005 aa	Predicted RBP	11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	NXPH1	P58417	271 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	BPIFB4	P59827	614 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	ATP11A	P98196	1134 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	SFSWAP	Q12872	951 aa	Known RBP	11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	BNIP3	Q12983	259 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	SLC25A52	Q3SY17	297 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	BRMS1L	Q5PSV4	323 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	PIP5KL1	Q5T9C9	394 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	NAPEPLD	Q6IQ20	393 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	LRSAM1	Q6UWE0	723 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	ZDHHC17	Q8IUH5	632 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	ATP11C	Q8NB49	1132 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	OR2A12	Q8NGT7	310 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	GRIN3A	Q8TCU5	1115 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	SAP25	Q8TEE9	199 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	PGAP3	Q96FM1	320 aa	Predicted RBP	11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	MAGEB5	Q9BZ81	275 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	VPS16	Q9H269	839 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	FZD3	Q9NPG1	666 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	GDF3	Q9NR23	364 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	ZNF212	Q9UDV6	495 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	TMEM59L	Q9UK28	342 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	HS3ST2	Q9Y278	367 aa		11.78	□□□□□ -0.52
TUBA1B-208	ENST00000552984	IGLV3-10	A0A075B6K4	115 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C1QTNF3-AMACR	E9PGA6	284 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	TLR4	O00206	839 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	KPNA3	O00505	521 aa	Predicted RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SRGAP2	O75044	1071 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SDC3	O75056	442 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CHRNB2	P17787	502 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	VASP	P50552	380 aa	Predicted RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	OXCT1	P55809	520 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SNX16	P57768	344 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	POLR2F	P61218	127 aa	Known RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	FMO1	Q01740	532 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	KRT31	Q15323	416 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CDO1	Q16878	200 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C22orf39	Q6P5X5	142 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C19orf48	Q6RUI8	117 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	BNIPL	Q7Z465	357 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	DSG4	Q86SJ6	1040 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	DRC7	Q8IY82	874 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	EID2	Q8N6I1	236 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	DCAF4L2	Q8NA75	395 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	JOSD2	Q8TAC2	188 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SLC30A5	Q8TAD4	765 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C11orf70	Q9BRQ4	267 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CCDC86	Q9H6F5	360 aa	Known RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	NLRC4	Q9NPP4	1024 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	LMBRD1	Q9NUN5	540 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	RRN3	Q9NYV6	651 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	DACH1	Q9UI36	760 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	LHX6	Q9UPM6	363 aa		11.77	□□□□□ -0.53
TUBA1B-208	ENST00000552984	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SHROOM3	Q8TF72	1996 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	DRGX	A6NNA5	263 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ALOX15B	O15296	676 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SLC31A1	O15431	190 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SLC7A4	O43246	635 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	RNGTT	O60942	597 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ZNF821	O75541	412 aa	Predicted RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	LSM8	O95777	96 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ITGAV	P06756	1048 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	EEF1G	P26641	437 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	OR1E1	P30953	314 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CHRNA3	P32297	505 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SCNN1A	P37088	669 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ARF5	P84085	180 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CDKAL1	Q5VV42	579 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	FAM46C	Q5VWP2	391 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	KANSL1	Q7Z3B3	1105 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	PRPF39	Q86UA1	669 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	TRIM69	Q86WT6	500 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	GPT2	Q8TD30	523 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CNDP2	Q96KP4	475 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	SPON2	Q9BUD6	331 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	STK33	Q9BYT3	514 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	NDFIP2	Q9NV92	336 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	RAX	Q9Y2V3	346 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	FCF1	Q9Y324	198 aa	Known RBP	11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	WASF2	Q9Y6W5	498 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ASXL3	Q9C0F0	2248 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	LRP4	O75096	1905 aa		11.76	□□□□□ -0.53
TUBA1B-208	ENST00000552984	KIF26B	Q2KJY2	2108 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984		A0A1W2PQU0	124 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	TRABD2B	A6NFA1	517 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ENC1	O14682	589 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ZMPSTE24	O75844	475 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	F9	P00740	461 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ACVRL1	P37023	503 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	ACADVL	P49748	655 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	JAM2	P57087	298 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	KRT83	P78385	493 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CYP4F3	Q08477	520 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	MTA1	Q13330	715 aa		11.75	□□□□□ -0.53
TUBA1B-208	ENST00000552984	CAMK2B	Q13554	666 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms