RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MPLP40238 635 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 MAGEA1P43355 309 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 SERPINH1P50454 418 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 SPEM2Q0P670 501 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 CST6Q15828 149 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 DPYSL2Q16555 572 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 PARP15Q460N3 678 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 LYSMD4Q5XG99 296 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 C22orf39Q6P5X5 142 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 TMTC1Q8IUR5 882 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 SPC24Q8NBT2 197 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 SLC35G2Q8TBE7 412 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 ACE2Q9BYF1 805 aaPredicted RBP18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 PABPC3Q9H361 631 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 OSGEPQ9NPF4 335 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 NYNRINQ9P2P1 1898 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-216ENST00000552301 C1QTNF3-AMACRE9PGA6 284 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 K7ERQ8 282 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 ZMPSTE24O75844 475 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 ADH1BP00325 375 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 IL1BP01584 269 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 TCF4P15884 667 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 MAN1A1P33908 653 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 DPP6P42658 865 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 ARF5P84085 180 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 SLC25A11Q02978 314 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 MESDQ14696 234 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 FAM46CQ5VWP2 391 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 GVINP1Q7Z2Y8 2422 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 UMODL1-AS1Q8N2C9 162 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 DEFB119Q8N690 84 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 FOXJ1Q92949 421 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 HMCESQ96FZ2 354 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 OMDQ99983 421 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 GPR174Q9BXC1 333 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 CEP44Q9C0F1 390 aa18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 WSB2Q9NYS7 404 aaPredicted RBP18.87■□□□□ 0.61
PRPF40B-216ENST00000552301 CXorf51AA0A1B0GTR3 108 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 ARHGAP42A6NI28 874 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 MEI4A8MW99 385 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 ALOX15BO15296 676 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 MID1O15344 667 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 BUB1O43683 1085 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 IGLV3-19P01714 112 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 ERCC2P18074 760 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 C5AR1P21730 350 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 SLC8A1P32418 973 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 HCAR3P49019 387 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 DNA2P51530 1060 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 CDH6P55285 790 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 USP30Q70CQ3 517 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 PCDH20Q8N6Y1 951 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 PIGKQ92643 395 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 HSPA12BQ96MM6 686 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 BTBD1Q9H0C5 482 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 FBXL12Q9NXK8 326 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 CWC15Q9P013 229 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 GON4LQ3T8J9 2241 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 CHD5Q8TDI0 1954 aa18.86■□□□□ 0.61
PRPF40B-216ENST00000552301 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 SOWAHDA6NJG2 315 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 MCF2LO15068 1137 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 SMAD6O43541 496 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 KDELR3O43731 214 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 FOXD2O60548 495 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 RNASEH2AO75792 299 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 MTA2O94776 668 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 KRT7P08729 469 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 C7P10643 843 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 ARHGAP25P42331 645 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 PTGER3P43115 390 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 NOP2P46087 812 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 NDST2P52849 883 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 ZNF33AQ06730 810 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 SYCP2LQ5T4T6 812 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 TXNRD3NBQ6F5E7 133 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 KIAA2013Q8IYS2 634 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 C12orf50Q8NA57 414 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 CELF6Q96J87 481 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 FAM129BQ96TA1 746 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 TNKS2Q9H2K2 1166 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 NOL6Q9H6R4 1146 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 SGK2Q9HBY8 427 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 PCDH18Q9HCL0 1135 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 VPS45Q9NRW7 570 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 SEMA4GQ9NTN9 838 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 FCF1Q9Y324 198 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 PCDHA13Q9Y5I0 950 aa18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 EPN1Q9Y6I3 576 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-216ENST00000552301 A0A1W2PP55 124 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 NDUFA10O95299 355 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 LCA5LO95447 670 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 SEMA4FO95754 770 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 FECHP22830 423 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 DPYSQ14117 519 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 CCDC6Q16204 474 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 CSRP2Q16527 193 aa18.84■□□□□ 0.61
PRPF40B-216ENST00000552301 WDR45BQ5MNZ6 344 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms