RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 PASD1Q8IV76 773 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 EID2Q8N6I1 236 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 DCBLD1Q8N8Z6 715 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 RNF34Q969K3 372 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 HDAC8Q9BY41 377 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 ANLNQ9NQW6 1124 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 VPS51Q9UID3 782 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 HELZ2Q9BYK8 2649 aaKnown RBP16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 PLK4O00444 970 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 LZTS3O60299 673 aaPredicted RBP16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 GRAP2O75791 330 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 CNTN5O94779 1100 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 ADCY5O95622 1261 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 PRNPP04156 253 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 KRT9P35527 623 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 NME3Q13232 169 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 STAT4Q14765 748 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 SLC25A52Q3SY17 297 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 TMEM259Q4ZIN3 620 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 ALFQ53S48 1182 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 HES3Q5TGS1 186 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 SLC47A2Q86VL8 602 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 TKTL2Q9H0I9 626 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 WDCPQ9H6R7 721 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 KLHL11Q9NVR0 708 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 DNAJC12Q9UKB3 198 aa16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
CALCOCO1-220ENST00000552282 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 LSM8O95777 96 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 RHOCP08134 193 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 JUPP14923 745 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 CHRNA3P32297 505 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 USP8P40818 1118 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 EIF2S3P41091 472 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 UBE2HP62256 183 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 C22orf39Q6P5X5 142 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 ABI3BPQ7Z7G0 1075 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 HORMAD1Q86X24 394 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 TMEM35BQ8NCS4 154 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 OR4C6Q8NH72 309 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 HNRNPLLQ8WVV9 542 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 HAPLN3Q96S86 360 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 CEP44Q9C0F1 390 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 MUC3BQ9H195 1237 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 CFAP46Q8IYW2 2715 aa16.5■□□□□ 0.23
CALCOCO1-220ENST00000552282 SYNJ2BP-COX16A0A087WUM0 186 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ILVBLA1L0T0 632 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ZMPSTE24O75844 475 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ENDOD1O94919 500 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 MT-CO1P00395 513 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 GIMD1P0DJR0 217 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 TFE3P19532 575 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 HNRNPA2B1P22626 353 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 MAT2AP31153 395 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 GGCXP38435 758 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ABCG1P45844 678 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 NRG1Q02297 640 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 SLC20A2Q08357 652 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 KCNMA1Q12791 1236 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 TARDBPQ13148 414 aaKnown RBP eCLIP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 MIIPQ5JXC2 388 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 XYLT1Q86Y38 959 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 DCP2Q8IU60 420 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 KLHDC7BQ96G42 594 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 BBC3Q96PG8 261 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 COX16Q9P0S2 106 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 ASXL3Q9C0F0 2248 aa16.49■□□□□ 0.23
CALCOCO1-220ENST00000552282 TRPM6Q9BX84 2022 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 A0A1W2PQU0 124 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 TLX3O43711 291 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 AP1G1O43747 822 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 SNAP91O60641 907 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 THEGLP0DJG4 465 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 CYP11B1P15538 503 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 ZNF18P17022 549 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 DGKAP23743 735 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 E2F1Q01094 437 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 GCNT7Q6ZNI0 430 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 ERN2Q76MJ5 926 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 FAM114A1Q8IWE2 563 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 SLC25A45Q8N413 288 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 PCDH20Q8N6Y1 951 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 ATP11CQ8NB49 1132 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 LSM14AQ8ND56 463 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 C18orf8Q96DM3 657 aa16.48■□□□□ 0.23
CALCOCO1-220ENST00000552282 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms