RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ITGB3P05106 788 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 APOA4P06727 396 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ENGP17813 658 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 GSTM2P28161 218 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 FMO4P31512 558 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 PTPN9P43378 593 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 HSD17B4P51659 736 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 PPP5CP53041 499 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 OAZ1P54368 228 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 CDH8P55286 799 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 PRAMEP78395 509 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TSPY1Q01534 308 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 CEBPZQ03701 1054 aaKnown RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ZBTB16Q05516 673 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 NIPAL4Q0D2K0 466 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 LRMPQ12912 555 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 MYBPC2Q14324 1141 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TAF11Q15544 211 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 CNGA3Q16281 694 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 KYNUQ16719 465 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ABHD17BQ5VST6 288 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ATG9BQ674R7 924 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TXNDC8Q6A555 127 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 SLC30A9Q6PML9 568 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 FAM83HQ6ZRV2 1179 aaPredicted RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 BCDIN3DQ7Z5W3 292 aaKnown RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TADA2BQ86TJ2 420 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 VSIG1Q86XK7 387 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 RFX6Q8HWS3 928 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 LRRC56Q8IYG6 542 aaPredicted RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 SLC25A43Q8WUT9 341 aaPredicted RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 TFAP2BQ92481 460 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 HSPH1Q92598 858 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 Q96MF0 132 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 FYTTD1Q96QD9 318 aaKnown RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ADGRE3Q9BY15 652 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 SMARCAD1Q9H4L7 1026 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 FBRSL1Q9HCM7 1045 aaKnown RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 Q9N2J8 555 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 CCDC177Q9NQR7 707 aaPredicted RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ASIC5Q9NY37 505 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 SLC25A13Q9UJS0 675 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 MKLN1Q9UL63 735 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 SIRT4Q9Y6E7 314 aaPredicted RBP4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 ADAMTS20P59510 1910 aa4.31□□□□□ -1.72
LSM6P2-201ENST00000552208 MAST3O60307 1309 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 FAM90A8PA6NJQ4 464 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 BTBD18B2RXH4 712 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 CLIC1O00299 241 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PEX1O43933 1283 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 HBP1O60381 514 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 TBX10O75333 385 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 HSPA4LO95757 839 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 MT-CO3P00414 261 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ADAP00813 363 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 HEXAP06865 529 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 NPSP0C0P6 89 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ELFN1P0C7U0 828 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 FAM90A13PP0C7W8 464 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 FAM90A24PP0C7X0 464 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PRR35P0CG20 571 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ITGAMP11215 1152 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 TGM2P21980 687 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 MCCP23508 829 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 BLKP51451 505 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 RHAGQ02094 409 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PCLAFQ15004 111 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ZNF124Q15973 351 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 TMEM266Q2M3C6 531 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 DPCR1Q3MIW9 517 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 BMP2KLQ5H9B9 411 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PLAC9Q5JTB6 97 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ZNF362Q5T0B9 420 aaPredicted RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 TMEM63BQ5T3F8 832 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 VWA5B1Q5TIE3 1220 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 TMEM154Q6P9G4 183 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ZNF474Q6S9Z5 364 aaPredicted RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PRSS45Q7RTY3 260 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 POMGNT1Q8WZA1 660 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 JAKMIP2Q96AA8 810 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 LENG9Q96B70 501 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 SLC22A18Q96BI1 424 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 PGAM5Q96HS1 289 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 CNDP2Q96KP4 475 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 ZNF347Q96SE7 839 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 MAK16Q9BXY0 300 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 IKZF4Q9H2S9 585 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 SNTG1Q9NSN8 517 aa4.3□□□□□ -1.72
LSM6P2-201ENST00000552208 MRGBPQ9NV56 204 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms