RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TYK2P29597 1187 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 VEGFBP49765 207 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 APLP1P51693 650 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 ARFIP2P53365 341 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 LIMK2P53671 638 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 SLC20A2Q08357 652 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 PSMD5Q16401 504 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 ANO4Q32M45 955 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 PCID2Q5JVF3 399 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 N4BP2L1Q5TBK1 243 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 CES4AQ5XG92 561 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 C16orf46Q6P387 395 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 ANKS3Q6ZW76 656 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 TAS1R1Q7RTX1 841 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 KCNMB4Q86W47 210 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 DCLK2Q8N568 766 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 BTN2A3PQ96KV6 586 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 SEPT5Q99719 369 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 ARHGEF3Q9NR81 526 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 TMEM248Q9NWD8 314 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 DONSONQ9NYP3 566 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 MARCH2Q9P0N8 246 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 MTO1Q9Y2Z2 717 aaKnown RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 SCN5AQ14524 2016 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 A0A0G2JND7 137 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 PLIN3O60664 434 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 ADRA1AP35348 466 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 PBX3P40426 434 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 MAGEA12P43365 314 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 KCNJ2P63252 427 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 OCRLQ01968 901 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 MTDHQ86UE4 582 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 CCDC117Q8IWD4 279 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 IPMKQ8NFU5 416 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 C2orf15Q8WU43 125 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 FATE1Q969F0 183 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 AZIN2Q96A70 460 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 FICDQ9BVA6 458 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 TMEM120AQ9BXJ8 343 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 SNX15Q9NRS6 342 aa14.26□□□□□ -0.13
RAB3IP-216ENST00000552199 BRCA2P51587 3418 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 CCDC195A0A1B0GUA6 201 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 MGRN1O60291 552 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 SNNO75324 88 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 NEBLO76041 1014 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 CNTN5O94779 1100 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PEX11BO96011 259 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 IGLV3-27P01718 113 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 SERPINB8P50452 374 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 CSE1LP55060 971 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 RPL10AP62906 217 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 IRX4P78413 519 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 DUSP4Q13115 394 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 MPP3Q13368 585 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 FASTKD1Q53R41 847 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PPM1JQ5JR12 505 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 FSTL4Q6MZW2 842 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PKN3Q6P5Z2 889 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 TFAP2DQ7Z6R9 452 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 TMEM173Q86WV6 379 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 MIB1Q86YT6 1006 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PARP9Q8IXQ6 854 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 BCL7CQ8WUZ0 217 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 SCLYQ96I15 445 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 ZNF778Q96MU6 729 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 MCMBPQ9BTE3 642 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 ENTPD7Q9NQZ7 604 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 IARS2Q9NSE4 1012 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 ZFP69BQ9UJL9 534 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 TRIM33Q9UPN9 1127 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 SLC12A8A0AV02 714 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 DRGXA6NNA5 263 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PQBP1O60828 265 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 CXCL10P02778 98 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 ZDHHC11BP0C7U3 371 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 STX3Q13277 289 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 HNRNPDQ14103 355 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 ALFQ53S48 1182 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 TAF1BQ53T94 588 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PDPK2PQ6A1A2 396 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 PRSS55Q6UWB4 352 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 IGSF8Q969P0 613 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 HMCESQ96FZ2 354 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 NSMCE4AQ9NXX6 385 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 HEY2Q9UBP5 337 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 TRIM17Q9Y577 477 aa14.25□□□□□ -0.13
RAB3IP-216ENST00000552199 SLC38A8A6NNN8 435 aa14.24□□□□□ -0.13
RAB3IP-216ENST00000552199 TIMM44O43615 452 aa14.24□□□□□ -0.13
RAB3IP-216ENST00000552199 DNAJC6O75061 913 aa14.24□□□□□ -0.13
RAB3IP-216ENST00000552199 PMPCBO75439 489 aa14.24□□□□□ -0.13
RAB3IP-216ENST00000552199 PROCP04070 461 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms