RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 PRKCIP41743 596 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ETV1P50549 477 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CAPZA1P52907 286 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 UCP3P55916 312 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 PER3P56645 1201 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ARHGAP8P85298 464 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 GABPB1Q06547 395 aaPredicted RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 GOLGA8DPQ0D2H9 430 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ELP6Q0PNE2 266 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ATP1A4Q13733 1029 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 BAATQ14032 418 aaPredicted RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 ARHGEF7Q14155 803 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ZNF766Q5HY98 468 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 EMC4Q5J8M3 183 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 SPDYAQ5MJ70 313 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 STEAP3Q658P3 488 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 FCRL6Q6DN72 434 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 PM20D1Q6GTS8 502 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 DENND1BQ6P3S1 775 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 RHPN2Q8IUC4 686 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ZNF366Q8N895 744 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 FSIP1Q8NA03 581 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 NEK11Q8NG66 645 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 RASSF8Q8NHQ8 419 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 SMARCC2Q8TAQ2 1214 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 AGR3Q8TD06 166 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 WASF1Q92558 559 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 DDX17Q92841 729 aaKnown RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 MIEF2Q96C03 454 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 INTS12Q96CB8 462 aaKnown RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 TMCO6Q96DC7 493 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CEP295NLQ96MC4 621 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 RHOXF2Q9BQY4 288 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 SLC25A23Q9BV35 468 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CCDC106Q9BWC9 280 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 STRA6Q9BX79 667 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CARD11Q9BXL7 1154 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 MRPL1Q9BYD6 325 aaKnown RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 GCOM2Q9BZD3 368 aaPredicted RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 MTMR12Q9C0I1 747 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 GLRX2Q9NS18 164 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 HOMER3Q9NSC5 361 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 INTS13Q9NVM9 706 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CNIH4Q9P003 139 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 SEPT10Q9P0V9 454 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 NTMQ9P121 344 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 ARMCX3Q9UH62 379 aaPredicted RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 NOSIPQ9Y314 301 aaKnown RBP6.5□□□□□ -1.37
VPS29-210ENST00000552130 ASB3Q9Y575 518 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 NFS1Q9Y697 457 aa6.5□□□□□ -1.37
VPS29-210ENST00000552130 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 LRRC72A6NJI9 287 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 ENO4A6NNW6 628 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 A8MZ25 164 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 BTBD18B2RXH4 712 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 HNRNPCL2B2RXH8 293 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 KCNJ18B7U540 433 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 H7C4K7 107 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 ACOT7O00154 380 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 SYN3O14994 580 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 GPR32O75388 356 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 LETM1O95202 739 aaPredicted RBP6.49□□□□□ -1.37
VPS29-210ENST00000552130 LY86O95711 162 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 DDAH2O95865 285 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 FUCA1P04066 466 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 ASGR1P07306 291 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 GRPP07492 148 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 TTKP33981 857 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 CENPAP49450 140 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 STAT5BP51692 787 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 STX1BP61266 288 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 OLR1P78380 273 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 MEF2AQ02078 507 aaPredicted RBP6.49□□□□□ -1.37
VPS29-210ENST00000552130 PRKCEQ02156 737 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 SF3A3Q12874 501 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS29-210ENST00000552130 CHIT1Q13231 466 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 KCNJ12Q14500 433 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 KCNAB1Q14722 419 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 SYCP1Q15431 976 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 DGKDQ16760 1214 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 INSCQ1MX18 579 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 MST1LQ2TV78 715 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 CYP4A22Q5TCH4 519 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 RBPMS2Q6ZRY4 209 aaKnown RBP6.49□□□□□ -1.37
VPS29-210ENST00000552130 KBTBD6Q86V97 674 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 FAM185AQ8N0U4 392 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 PQLC1Q8N2U9 271 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 OR52K1Q8NGK4 314 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 URGCPQ8TCY9 931 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 PLEKHO2Q8TD55 490 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 ADAMTS17Q8TE56 1095 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 DTNBP1Q96EV8 351 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 ZDHHC12Q96GR4 267 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 CNOT6LQ96LI5 555 aaKnown RBP6.49□□□□□ -1.37
VPS29-210ENST00000552130 ZNF396Q96N95 335 aaPredicted RBP6.49□□□□□ -1.37
VPS29-210ENST00000552130 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 GAL3ST4Q96RP7 486 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 KCNK16Q96T55 309 aa6.49□□□□□ -1.37
VPS29-210ENST00000552130 FERMT1Q9BQL6 677 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms