RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ADPRHP54922 357 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 NCOA4Q13772 614 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 BMT2Q1RMZ1 405 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 ISXQ2M1V0 245 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 HNRNPA1L2Q32P51 320 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 POM121L1PQ3SYA9 428 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3GQ6DHY5 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3CQ6IPX1 549 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC186Q7Z3E2 898 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 KIAA0907Q7Z7F0 614 aaPredicted RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 PRPF39Q86UA1 669 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 WFDC8Q8IUA0 241 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 FAM217AQ8IXS0 508 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TBC1D3Q8IZP1 549 aaPredicted RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CRYBG2Q8N1P7 616 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF276Q8N554 614 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 AADATQ8N5Z0 425 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.523e-6■■■□□ 16.3
HOXB3-213ENST00000552000 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 MAPK15Q8TD08 544 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TMA16Q96EY4 203 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 MYO19Q96H55 970 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 APOLD1Q96LR9 279 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 SLC46A1Q96NT5 459 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 TWNKQ96RR1 684 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CCNL2Q96S94 520 aaPredicted RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CDK5RAP1Q96SZ6 601 aaKnown RBP5.57□□□□□ -1.52
HOXB3-213ENST00000552000 PANK2Q9BZ23 570 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 ABCG4Q9H172 646 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 KIAA1586Q9HCI6 787 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 AGPAT3Q9NRZ7 376 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF358Q9NW07 568 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CLIC5Q9NZA1 410 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 SEPT3Q9UH03 358 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 FZD4Q9ULV1 537 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 PCDHGA11Q9Y5H2 935 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 U3KQA8 63 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 POLEQ07864 2286 aa5.57□□□□□ -1.52
HOXB3-213ENST00000552000 CELSR1Q9NYQ6 3014 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 APCP25054 2843 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CPED1A4D0V7 1026 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CDRT15L2A8MXV6 281 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TTC34A8MYJ7 566 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 LATO43561 262 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 STX6O43752 255 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 MAGEC1O60732 1142 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TBL1XO60907 577 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PIAS2O75928 621 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TNFSF15O95150 251 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 GJB6O95452 261 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 VNN1O95497 513 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 BMP15O95972 392 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 P4HA1P13674 534 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 GOT1P17174 413 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TGM2P21980 687 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CSKP41240 450 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 HARS2P49590 506 aaKnown RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 DUSP3P51452 185 aaPredicted RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 SGSHP51688 502 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 ST8SIA6P61647 398 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 ASIC1P78348 528 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 OVGP1Q12889 678 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 SRSF6Q13247 344 aaKnown RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 STAT4Q14765 748 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TRIP4Q15650 581 aaPredicted RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PCSK7Q16549 785 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 C9orf64Q5T6V5 341 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 HIST2H2BCQ6DN03 193 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 SPOPLQ6IQ16 392 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 RFWD3Q6PCD5 774 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 XKR5Q6UX68 686 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 STXBP4Q6ZWJ1 553 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 IQCHQ86VS3 1027 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 UNC93AQ86WB7 457 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC65Q8IXS2 484 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 STK40Q8N2I9 435 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 XXYLT1Q8NBI6 393 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 IFI44Q8TCB0 444 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PLEKHO2Q8TD55 490 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 ARRDC3Q96B67 414 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PLD4Q96BZ4 506 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 MRRFQ96E11 262 aaKnown RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 SGF29Q96ES7 293 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CYFIP2Q96F07 1278 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 KLHDC7BQ96G42 594 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PRR11Q96HE9 360 aaPredicted RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 FAM129BQ96TA1 746 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 MYOCQ99972 504 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 AKTIPQ9H8T0 292 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 PNPLA8Q9NP80 782 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 KLHL11Q9NVR0 708 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 STIM2Q9P246 746 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 ARHGAP20Q9P2F6 1191 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 TPX2Q9ULW0 747 aaKnown RBP5.56□□□□□ -1.52
HOXB3-213ENST00000552000 MAN2B2Q9Y2E5 1009 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms