RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 MKRN2Q9H000 416 aaKnown RBP17.73■□□□□ 0.43
CDK4-208ENST00000551706 PRSS16Q9NQE7 514 aa17.73■□□□□ 0.43
CDK4-208ENST00000551706 VPS51Q9UID3 782 aa17.73■□□□□ 0.43
CDK4-208ENST00000551706 SLCO3A1Q9UIG8 710 aa17.73■□□□□ 0.43
CDK4-208ENST00000551706 HPCAL4Q9UM19 191 aa17.73■□□□□ 0.43
CDK4-208ENST00000551706 DSPP15924 2871 aaKnown RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 SRRM3A6NNA2 597 aaPredicted RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 H3BRJ5 948 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 ATP9BO43861 1147 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 RARAP10276 462 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 C7P10643 843 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 ARL4AP40617 200 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 STK19P49842 368 aaPredicted RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 CLCN6P51797 869 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 COPAP53621 1224 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 GEMIN4P57678 1058 aaKnown RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 YBEYP58557 167 aaPredicted RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 POLD3Q15054 466 aaPredicted RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 PARP15Q460N3 678 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 KCNT1Q5JUK3 1230 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 KIAA1324Q6UXG2 1013 aaKnown RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 RFX8Q6ZV50 586 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 SH2D3CQ8N5H7 860 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 HSPH1Q92598 858 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 SIPA1Q96FS4 1042 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 ACE2Q9BYF1 805 aaPredicted RBP17.72■□□□□ 0.43
CDK4-208ENST00000551706 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDK4-208ENST00000551706 NDFIP2Q9NV92 336 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 LHX6Q9UPM6 363 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 SDK1Q7Z5N4 2213 aa17.72■□□□□ 0.43
CDK4-208ENST00000551706 NBEAQ8NFP9 2946 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 MUC22E2RYF6 1773 aaPredicted RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 A0A0A6YYK5 440 aaPredicted RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 GOLGA6L3A6NEY3 463 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 ZSCAN5CA6NGD5 496 aaPredicted RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 TTC34A8MYJ7 566 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 CBX4O00257 560 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 SNAP91O60641 907 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 RNASEH1O60930 286 aaKnown RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 EPN2O95208 641 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 KRT7P08729 469 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 ACADMP11310 421 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 TCF4P15884 667 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 GOT1P17174 413 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 P2RY2P41231 377 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 NUMBP49757 651 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 NDST2P52849 883 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 HADHBP55084 474 aaKnown RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 FOXC1Q12948 553 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 MESDQ14696 234 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 ACCSLQ4AC99 568 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 UMODL1-AS1Q8N2C9 162 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 ATP11CQ8NB49 1132 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 ERLEC1Q96DZ1 483 aa17.71■□□□□ 0.43
CDK4-208ENST00000551706 CALR3Q96L12 384 aaKnown RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 RCOR3Q9P2K3 495 aaPredicted RBP17.71■□□□□ 0.43
CDK4-208ENST00000551706 LAMA1P25391 3075 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 SIN3BO75182 1162 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 SRCP12931 536 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 SLC1A1P43005 524 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 SFSWAPQ12872 951 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 KRT81Q14533 505 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 ELAVL3Q14576 367 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 ELF2Q15723 593 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 MAP7D1Q3KQU3 841 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 ZNF776Q68DI1 518 aaPredicted RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 SLC36A4Q6YBV0 504 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 POLNQ7Z5Q5 900 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 TXLNBQ8N3L3 684 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 LZTR1Q8N653 840 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 FRS2Q8WU20 508 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 ZC3H10Q96K80 434 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 RSPH9Q9H1X1 276 aaPredicted RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 CWC15Q9P013 229 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 SCML1Q9UN30 329 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 GCN1Q92616 2671 aaKnown RBP17.7■□□□□ 0.42
CDK4-208ENST00000551706 DOCK4Q8N1I0 1966 aa17.7■□□□□ 0.42
CDK4-208ENST00000551706 ZMPSTE24O75844 475 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 DNTTP04053 509 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 ERCC2P18074 760 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 SPINK2P20155 84 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 OXTRP30559 389 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 ACVRL1P37023 503 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 ARF5P84085 180 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 DPYSQ14117 519 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 DLG2Q15700 870 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
CDK4-208ENST00000551706 PLA2G2CQ5R387 149 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 TXNRD3NBQ6F5E7 133 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms