RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CLSTN3Q9BQT9 956 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ALG13Q9NP73 1137 aaKnown RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 PLLPQ9Y342 182 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 J3KR12 359 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 AP3B1O00203 1094 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 C2CD2LO14523 706 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 TPP1O14773 563 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 UBOX5O94941 541 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 GJB5O95377 273 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ALDOAP04075 364 aaKnown RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 SOD2P04179 222 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ITGA2BP08514 1039 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 CLTBP09497 229 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 HMGA1P17096 107 aaKnown RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 BGNP21810 368 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 CRHR1P34998 444 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 MAGEA12P43365 314 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 KCNQ1P51787 676 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 LIMK2P53671 638 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 DEFB103AP81534 67 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 GALNTL6Q49A17 601 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 GRTP1Q5TC63 336 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 SNX30Q5VWJ9 437 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 KCNMB4Q86W47 210 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 CCDC117Q8IWD4 279 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 PDZD8Q8NEN9 1154 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 OVCA2Q8WZ82 227 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ISL2Q96A47 359 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 MRGPRX2Q96LB1 330 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF558Q96NG5 402 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 PPP1R2P1Q96PQ5 205 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 PLCD4Q9BRC7 762 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 KIFC1Q9BW19 673 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 IQCGQ9H095 443 aaKnown RBP11.71□□□□□ -0.53
RAB5C-208ENST00000551338 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 SP110Q9HB58 689 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 TMEM39AQ9NV64 488 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 SLC12A4Q9UP95 1085 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 YIPF1Q9Y548 306 aa11.71□□□□□ -0.53
RAB5C-208ENST00000551338 ABHD14A-ACY1A0A1B0GW23 586 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ACSL4O60488 711 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 GLRA3O75311 464 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ABLIM3O94929 683 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 IL1BP01584 269 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 GSTA1P08263 222 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 SLC6A4P31645 630 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 SCTRP47872 440 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TUFMP49411 452 aaKnown RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 KPNA1P52294 538 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 DSG1Q02413 1049 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TNK2Q07912 1038 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 SLC10A7Q0GE19 358 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MPP3Q13368 585 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 HNRNPDQ14103 355 aaKnown RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 C5orf22Q49AR2 442 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 PCID2Q5JVF3 399 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ACBD5Q5T8D3 534 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TEDDM1Q5T9Z0 273 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TMCO2Q7Z6W1 182 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TEX26Q8N6G2 289 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 CCDC63Q8NA47 563 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TOP1MTQ969P6 601 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 RPRD1AQ96P16 312 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 KLHL5Q96PQ7 755 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MCMBPQ9BTE3 642 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MECRQ9BV79 373 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 SLC25A51Q9H1U9 297 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MRM3Q9HC36 420 aaKnown RBP11.7□□□□□ -0.54
RAB5C-208ENST00000551338 ATP13A1Q9HD20 1204 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 NT5MQ9NPB1 228 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 CHRAC1Q9NRG0 131 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 HAUS2Q9NVX0 235 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 HSFX1Q9UBD0 423 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 GGT7Q9UJ14 662 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 EMCNQ9ULC0 261 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 TCAF1Q9Y4C2 921 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 CAPN7Q9Y6W3 813 aa11.7□□□□□ -0.54
RAB5C-208ENST00000551338 MAGEB16A2A368 324 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 F5H5T6 163 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 KLF11O14901 512 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 PMPCBO75439 489 aa11.69□□□□□ -0.54
RAB5C-208ENST00000551338 DNAJC8O75937 253 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms