RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 LRRC14Q15048 493 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SLC1A5Q15758 541 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SLC14A2Q15849 920 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 MGAT5BQ3V5L5 792 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SYCP2LQ5T4T6 812 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SDHAF4Q5VUM1 108 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 RWDD4Q6NW29 188 aaKnown RBP9.37□□□□□ -0.91
TMEM116-213ENST00000550831 TRMT10BQ6PF06 316 aaKnown RBP9.37□□□□□ -0.91
TMEM116-213ENST00000550831 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 PPM1NQ8N819 430 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF461Q8TAF7 563 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 TADA1Q96BN2 335 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SERAC1Q96JX3 654 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 CABS1Q96KC9 395 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 B3GALT6Q96L58 329 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 MCMBPQ9BTE3 642 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 KIFC1Q9BW19 673 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 KDM4CQ9H3R0 1056 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 ARNT2Q9HBZ2 717 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SYBUQ9NX95 663 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 VANGL2Q9ULK5 521 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 USP15Q9Y4E8 981 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-213ENST00000550831 MAD1L1Q9Y6D9 718 aa9.37□□□□□ -0.91
TMEM116-213ENST00000550831 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ZCWPW2A0A1B0GU75 182 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 GOLGA6L7A0A1B0GV03 622 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 TRIM49D1C9J1S8 452 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 NT5C1B-RDH14C9J2C7 533 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 TLR5O60602 858 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 SPAG7O75391 227 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 BAIAP3O94812 1187 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 LATS1O95835 1130 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 TIMP1P01033 207 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 VIMP08670 466 aaKnown RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 HMGA1P17096 107 aaKnown RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 LAG3P18627 525 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CRHR1P34998 444 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 MAGEA12P43365 314 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 PAPOLAP51003 745 aaKnown RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 MPP3Q13368 585 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 MTM1Q13496 603 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 RAB33AQ14088 237 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 INSCQ1MX18 579 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 PARP15Q460N3 678 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 FAM109BQ6ICB4 259 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 FBXL22Q6P050 247 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 PRSS55Q6UWB4 352 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 NETO2Q8NC67 525 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 OR52K1Q8NGK4 314 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 RAB3IL1Q8TBN0 382 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF398Q8TD17 642 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 MGARPQ8TDB4 240 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 TCP10LQ8TDR4 215 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CCT6BQ92526 530 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 PLD4Q96BZ4 506 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CERS2Q96G23 380 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CELF6Q96J87 481 aaKnown RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF599Q96NL3 588 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 AGAP3Q96P47 875 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 SEPT5Q99719 369 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CPNE1Q99829 537 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CLSTN3Q9BQT9 956 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 CEP41Q9BYV8 373 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 SLC25A51Q9H1U9 297 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 RABEP2Q9H5N1 569 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ATP13A1Q9HD20 1204 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ENTPD7Q9NQZ7 604 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 VPS45Q9NRW7 570 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 TMEM39AQ9NV64 488 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 NSMCE4AQ9NXX6 385 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 GRID1Q9ULK0 1009 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
TMEM116-213ENST00000550831 ZNF840PA6NDX5 716 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 DFFAO00273 331 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 ADAM12O43184 909 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 LPXNO60711 386 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 EDF1O60869 148 aaKnown RBP9.35□□□□□ -0.91
TMEM116-213ENST00000550831 SIN3BO75182 1162 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 KIAA0754O94854 1291 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 OR1D2P34982 312 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 ATP5C1P36542 298 aaKnown RBP9.35□□□□□ -0.91
TMEM116-213ENST00000550831 GP5P40197 560 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 POLD2P49005 469 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 CSRP3P50461 194 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 RENBPP51606 427 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 CSE1LP55060 971 aaKnown RBP9.35□□□□□ -0.91
TMEM116-213ENST00000550831 SESN2P58004 480 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-213ENST00000550831 CREMQ03060 361 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 IL10RBQ08334 325 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 ANKRD20A4Q4UJ75 823 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 PCID2Q5JVF3 399 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 C10orf120Q5SQS8 335 aa9.35□□□□□ -0.91
TMEM116-213ENST00000550831 GRTP1Q5TC63 336 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms