RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 BAIAP3O94812 1187 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 TMEM63AO94886 807 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 F9P00740 461 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 ST6GAL1P15907 406 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 CAPN3P20807 821 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 TYK2P29597 1187 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 CASP2P42575 452 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 EIF5P55010 431 aaKnown RBP5.31□□□□□ -1.56
LIMA1-205ENST00000550592 CDH15P55291 814 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 RHAGQ02094 409 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 ZBTB16Q05516 673 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 MTA1Q13330 715 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 IL13RA2Q14627 380 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 NAA25Q14CX7 972 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 ZNF766Q5HY98 468 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 NAPEPLDQ6IQ20 393 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 H1FNTQ75WM6 255 aaPredicted RBP5.31□□□□□ -1.56
LIMA1-205ENST00000550592 KLBQ86Z14 1044 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 SLC16A11Q8NCK7 471 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 RUFY2Q8WXA3 655 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 KAT2BQ92831 832 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 CHFRQ96EP1 664 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 CADM1Q9BY67 442 aaKnown RBP5.31□□□□□ -1.56
LIMA1-205ENST00000550592 Q9N2J8 555 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 SEMA4BQ9NPR2 832 aaPredicted RBP5.31□□□□□ -1.56
LIMA1-205ENST00000550592 MAP3K20Q9NYL2 800 aaKnown RBP5.31□□□□□ -1.56
LIMA1-205ENST00000550592 HCN3Q9P1Z3 774 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 OSGIN2Q9Y236 505 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 TNFSF13BQ9Y275 285 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 AGLP35573 1532 aa5.31□□□□□ -1.56
LIMA1-205ENST00000550592 VWDEQ8N2E2 1590 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 WDR33Q9C0J8 1336 aaKnown RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 A0A087X0M5 115 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 A0A1B0GX30 115 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 TMEM247A6NEH6 219 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 TNPO2O14787 897 aaKnown RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 SPTLC2O15270 562 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 INPPL1O15357 1258 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 RNF8O76064 485 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 RTN3O95197 1032 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 DDX58O95786 925 aaKnown RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 CHRM4P08173 479 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 TFEBP19484 476 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 PAFAH1B1P43034 410 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 YPEL5P62699 121 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 HSF1Q00613 529 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 NHLH1Q02575 133 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 AP5B1Q2VPB7 878 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 PLK5Q496M5 336 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 EARS2Q5JPH6 523 aaKnown RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 CLEC4GQ6UXB4 293 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 UBE2Q1Q7Z7E8 422 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 PCGF5Q86SE9 256 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 ARL14EPQ8N8R7 260 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 BOLLQ8N9W6 283 aaKnown RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 SETD9Q8NE22 299 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 TNIP2Q8NFZ5 429 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-205ENST00000550592 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 RAB40AQ8WXH6 277 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 IP6K1Q92551 441 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 MAP4K1Q92918 833 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 EYA3Q99504 573 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 LMAN2LQ9H0V9 348 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 ZNHIT2Q9UHR6 403 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 FBXO4Q9UKT5 387 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 CNPY2Q9Y2B0 182 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 LRP5O75197 1615 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 KAT6AQ92794 2004 aa5.3□□□□□ -1.56
LIMA1-205ENST00000550592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 CEP170BQ9Y4F5 1589 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 ZNF142P52746 1687 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 TCRBV7S3A2A0A539 114 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 SLC22A23A1A5C7 686 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 LINC01548A6NM66 108 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 TSPAN4O14817 238 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 LATS1O95835 1130 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 SLPIP03973 132 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 URODP06132 367 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 MAN1A1P33908 653 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 GGT5P36269 586 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 STAT1P42224 750 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 PROK1P58294 105 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 C1QTNF8P60827 252 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 PTP4A2Q12974 167 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 TDGQ13569 410 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 SLC18A3Q16572 532 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 TMEM119Q4V9L6 283 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 KIAA1755Q5JYT7 1200 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 UBAP2Q5T6F2 1119 aaKnown RBP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 FAM69AQ5T7M9 428 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 STRIP1Q5VSL9 837 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 SLC22A25Q6T423 547 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 R3HCC1LQ7Z5L2 792 aaKnown RBP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 NEK8Q86SG6 692 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 SCAIQ8N9R8 606 aa5.29□□□□□ -1.56
LIMA1-205ENST00000550592 TDRD7Q8NHU6 1098 aaKnown RBP5.29□□□□□ -1.56
LIMA1-205ENST00000550592 NFKBIDQ8NI38 313 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms