RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZNHIT2Q9UHR6 403 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 CCNA2P20248 432 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 GLDCP23378 1020 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ZIK1Q3SY52 487 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 CCDC153Q494R4 210 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 NIPAL1Q6NVV3 410 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 SCAIQ8N9R8 606 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 MFHAS1Q9Y4C4 1052 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 RAD23AP54725 363 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 DHFR2Q86XF0 187 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 PARP8Q8N3A8 854 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 HM13Q8TCT9 377 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ADI1Q9BV57 179 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 CYP4F12Q9HCS2 524 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 CNTNAP4Q9C0A0 1308 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 BMP10O95393 424 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 TNNC2P02585 160 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 HNRNPLP14866 589 aaKnown RBP eCLIP12.31□□□□□ -0.44
VDR-208ENST00000550325 SFNP31947 248 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 ATXN1P54253 815 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 MAGEE2Q8TD90 523 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 SNRNP25Q9BV90 132 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 NPLQ9BXD5 320 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 ACE2Q9BYF1 805 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ACOT8O14734 319 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 WDR46O15213 610 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 PAPSS1O43252 624 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 MICAL2O94851 1124 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 C2P06681 752 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 POLBP06746 335 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 SLC7A2P52569 658 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 TUBA4AP68366 448 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 OTUD3Q5T2D3 398 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 FSTL4Q6MZW2 842 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 CCDC60Q8IWA6 550 aaPredicted RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 RPL10LQ96L21 214 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 CNPY3Q9BT09 278 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ING2Q9H160 280 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 RUVBL2Q9Y230 463 aaKnown RBP12.31□□□□□ -0.44
VDR-208ENST00000550325 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
VDR-208ENST00000550325 ATP6AP2A0A1C7CYW4 349 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 B4GAT1O43505 415 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ATP6AP2O75787 350 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 NCAM1P13591 858 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 SDC4P31431 198 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ZNF132P52740 706 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 POU5F1BQ06416 359 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 PGM5Q15124 567 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 SPPL2CQ8IUH8 684 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 DGCR6LQ9BY27 220 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TRIM8Q9BZR9 551 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 FANCEQ9HB96 536 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 RAP2CQ9Y3L5 183 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 LYPLA2O95372 231 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 PRKCGP05129 697 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TPH1P17752 444 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ACADVLP49748 655 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 NKX2-5P52952 324 aaPredicted RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 ACTR2P61160 394 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 OCA2Q04671 838 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ZBTB17Q13105 803 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 RPS27LQ71UM5 84 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 TMEM126BQ8IUX1 230 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 CAPSLQ8WWF8 208 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 SLC7A3Q8WY07 619 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 CERS2Q96G23 380 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 NTPCRQ9BSD7 190 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 PIF1Q9H611 641 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 IARS2Q9NSE4 1012 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 PCDHGC3Q9UN70 934 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ATP11BQ9Y2G3 1177 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 PRORSD1PA6NEY8 169 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms