RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 ERICH1Q86X53 443 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 OR14C36Q8NHC7 312 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 BAHD1Q8TBE0 780 aaPredicted RBP13.78□□□□□ -0.2
NUP188-211ENST00000550219 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
NUP188-211ENST00000550219 SLC2A13Q96QE2 648 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 CDC6Q99741 560 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 PRMT1Q99873 361 aaKnown RBP13.78□□□□□ -0.2
NUP188-211ENST00000550219 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 SLC25A13Q9UJS0 675 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 VANGL2Q9ULK5 521 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 FZD4Q9ULV1 537 aa13.78□□□□□ -0.2
NUP188-211ENST00000550219 REXO2Q9Y3B8 237 aaKnown RBP13.78□□□□□ -0.2
NUP188-211ENST00000550219 ANKRD62A6NC57 917 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 BNIP3LO60238 219 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 GLI1P08151 1106 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 C7P10643 843 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 SLC2A3P11169 496 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 C5AR1P21730 350 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 METAP1P53582 386 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 ADPRHP54922 357 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 PPP2CBP62714 309 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 RACK1P63244 317 aaKnown RBP13.77□□□□□ -0.21
NUP188-211ENST00000550219 PPP2CAP67775 309 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.21
NUP188-211ENST00000550219 ELAVL3Q14576 367 aaKnown RBP13.77□□□□□ -0.21
NUP188-211ENST00000550219 INAVAQ3KP66 663 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 ACCSLQ4AC99 568 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 CXorf57Q6NSI4 855 aaKnown RBP13.77□□□□□ -0.21
NUP188-211ENST00000550219 FBXL22Q6P050 247 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 SND1Q7KZF4 910 aaKnown RBP eCLIP13.77□□□□□ -0.21
NUP188-211ENST00000550219 MARCH9Q86YJ5 346 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 MSANTD4Q8NCY6 345 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 PTPRN2Q92932 1015 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 C18orf8Q96DM3 657 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 FAM129BQ96TA1 746 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 ASNSD1Q9NWL6 643 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
NUP188-211ENST00000550219 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 FAM221BA6H8Z2 402 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 TMCO5BA8MYB1 307 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 M0QYT0 321 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 VILLO15195 856 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 WNT1P04628 370 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 CALB1P05937 261 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 MYBL1P10243 752 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 GOT1P17174 413 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 SCNN1AP37088 669 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 MAGEA1P43355 309 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 SULT1E1P49888 294 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
NUP188-211ENST00000550219 SULT2A1Q06520 285 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 SLC12A1Q13621 1099 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
NUP188-211ENST00000550219 SPA17Q15506 151 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.76□□□□□ -0.21
NUP188-211ENST00000550219 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
NUP188-211ENST00000550219 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 OR52K2Q8NGK3 314 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 TRIM11Q96F44 468 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 SERAC1Q96JX3 654 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 C11orf70Q9BRQ4 267 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 SIK2Q9H0K1 926 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 FTSJ1Q9UET6 329 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 PCDHA13Q9Y5I0 950 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 HS3ST4Q9Y661 456 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 IGF2RP11717 2491 aa13.76□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3DA0A087WVF3 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3IA0A087WXS9 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3EA0A087X179 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3KA0A087X1G2 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3FA6NER0 549 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3LB9A6J9 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 PAGE1O75459 146 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 H2AFZP0C0S5 128 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TMEM253P0C7T8 217 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3HP0C7X1 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 CD38P28907 300 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 MAT2AP31153 395 aaKnown RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 OXCT1P55809 520 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms