RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
CHMP1A-208ENST00000550102 DNAH14Q0VDD8 3507 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 A0A087X0T9 212 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 EIF3CLB5ME19 914 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 C1QTNF3-AMACRE9PGA6 284 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 FGF10O15520 208 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 CREB3O43889 395 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 BNIP3LO60238 219 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 RAMP2O60895 175 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 FAM228BP0C875 321 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 ENGP17813 658 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 GLDCP23378 1020 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 HNRNPH3P31942 346 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 HTR7P34969 479 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 SERPINH1P50454 418 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 GEMIN4P57678 1058 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 SEMA3BQ13214 749 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 FAM46CQ5VWP2 391 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 ZCCHC9Q8N567 271 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 AADATQ8N5Z0 425 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 RTL3Q8N8U3 475 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 EIF3CQ99613 913 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 NCAPGQ9BPX3 1015 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 MAGEB5Q9BZ81 275 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 MIR1-1HGQ9H1L0 117 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 MAGEH1Q9H213 219 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 NDFIP2Q9NV92 336 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 ARHGAP20Q9P2F6 1191 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 DNAI1Q9UI46 699 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 AP4E1Q9UPM8 1137 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 NCOR2Q9Y618 2525 aa17.62■□□□□ 0.41
CHMP1A-208ENST00000550102 TMEM131Q92545 1883 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 CXorf51AA0A1B0GTR3 108 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 A0A1B0GTW7 788 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 LRRC72A6NJI9 287 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 K7ERQ8 282 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 MCF2LO15068 1137 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 ZMPSTE24O75844 475 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 GOT1P17174 413 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 MAOBP27338 520 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 ACVRL1P37023 503 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 MAPK8P45983 427 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 RECQLP46063 649 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 TPI1P60174 286 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 SLC20A2Q08357 652 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 VSTM4Q8IW00 320 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 HDDC3Q8N4P3 179 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 DNAJC7Q99615 494 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 SNRNP25Q9BV90 132 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 ACE2Q9BYF1 805 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 CEP44Q9C0F1 390 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 CATSPERBQ9H7T0 1116 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 EIF2B4Q9UI10 523 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 HPCAL4Q9UM19 191 aa17.61■□□□□ 0.41
CHMP1A-208ENST00000550102 DCDC2BA2VCK2 349 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 C4orf47A7E2U8 309 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 BCAT2O15382 392 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 SMAD6O43541 496 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 FSBPO95073 299 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 SYPP08247 313 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ATXN3P54252 364 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ADPRHP54922 357 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ARF5P84085 180 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 POLD3Q15054 466 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 KIAA0895LQ68EN5 471 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ALKBH5Q6P6C2 394 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 PCDH20Q8N6Y1 951 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 OR8K1Q8NGG5 319 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 OR2A12Q8NGT7 310 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 OR2T34Q8NGX1 318 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 PIP4K2CQ8TBX8 421 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ARHGEF2Q92974 986 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 BIRC7Q96CA5 298 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 PEBP4Q96S96 227 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 THAP2Q9H0W7 228 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 NEUROG2Q9H2A3 272 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 DHX35Q9H5Z1 703 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ZNHIT6Q9NWK9 470 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 GPATCH2LQ9NWQ4 482 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 PCSK1NQ9UHG2 260 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 PPM1HQ9ULR3 514 aa17.6■□□□□ 0.41
CHMP1A-208ENST00000550102 ZSCAN5CA6NGD5 496 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 FAM47DPA6NHR8 397 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 CDX4O14627 284 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 SLC7A4O43246 635 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 MFAP3LO75121 409 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 LRCH4O75427 683 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 PRNPP04156 253 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 MIPP30301 263 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 DRD3P35462 400 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 EIF4A3P38919 411 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 METAP1P53582 386 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 GALCP54803 685 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 ACAP1Q15027 740 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 ERMARDQ5T6L9 678 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 NCEH1Q6PIU2 408 aa17.59■□□□□ 0.41
CHMP1A-208ENST00000550102 PSTKQ8IV42 348 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms