RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 NTAN1Q96AB6 310 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 FANCEQ9HB96 536 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 CCDC189A1A4V9 331 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 DNTTP04053 509 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 MYBL2P10244 700 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 KCNE1P15382 129 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PPIBP23284 216 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 GPC1P35052 558 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 ELK3P41970 407 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PRICKLE1Q96MT3 831 aaPredicted RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 FAM111AQ96PZ2 611 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 BATF3Q9NR55 127 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 OPTCQ9UBM4 332 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 AGO1Q9UL18 857 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 F8VP50 259 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 GOLGA8RI6L899 631 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 CTSEP14091 401 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PFKLP17858 780 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 CASP5P51878 434 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 TMC3Q7Z5M5 1100 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PGLYRP2Q96PD5 576 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SPATA5L1Q9BVQ7 753 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 ADGRA3Q8IWK6 1321 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 A0A1B0GVM2 712 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 TCAF2A6NFQ2 919 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 E7ENQ6 273 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 KPNA3O00505 521 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 H2AFXP16104 143 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 HCAR3P49019 387 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CCL23P55773 120 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZNF33AQ06730 810 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZC3H12AQ5D1E8 599 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CAPRIN2Q6IMN6 1127 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 MAMDC4Q6UXC1 1216 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 SERPINA13PQ6UXR4 307 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 KIAA0408Q6ZU52 694 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CYP4Z2PQ8N1L4 340 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 C7orf57Q8NEG2 295 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 AHCYL2Q96HN2 611 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 MIEF1Q9NQG6 463 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 PHPT1Q9NRX4 125 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 NDUFA13Q9P0J0 144 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CNTN3Q9P232 1028 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 FKBP9O95302 570 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 KRT8P05787 483 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 GUCY1A3Q02108 690 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CHRNB3Q05901 458 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CDK18Q07002 472 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CRHR2Q13324 411 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 KHDRBS2Q5VWX1 349 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 DRICH1Q6PGQ1 229 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 BNC2Q6ZN30 1099 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 FKBP9P1Q75LS8 142 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 RTL10Q7L3V2 364 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 LNX1Q8TBB1 728 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 FBXO25Q8TCJ0 367 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 DEC1Q9P2X7 70 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 STXBP5LQ9Y2K9 1186 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 UBDO15205 165 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 MGAT1P26572 445 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 PBX1P40424 430 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 LRRC74AQ0VAA2 488 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 DYNC1I2Q13409 638 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 LAPTM5Q13571 262 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 INAVAQ3KP66 663 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 TIGD5Q53EQ6 642 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 INTS11Q5TA45 600 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZNF470Q6ECI4 717 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 GPSM1Q86YR5 675 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CDK20Q8IZL9 346 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 RASGEF1CQ8N431 466 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ACTRT2Q8TDY3 377 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 PPP3R2Q96LZ3 170 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 SAR1AQ9NR31 198 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 PDZK1P1A8MUH7 402 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 TSPAN3O60637 253 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 OCM2P0CE71 109 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 NTSP30990 170 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 MAGEA11P43364 429 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 CLK3P49761 638 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 MRPS25P82663 173 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 R3HCC1LQ7Z5L2 792 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ECHDC2Q86YB7 292 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 NIPA2Q8N8Q9 360 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 SMG7Q92540 1137 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 BBS2Q9BXC9 721 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 DPY30Q9C005 99 aa9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 NXF3Q9H4D5 531 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-216ENST00000549396 ZDHHC6Q9H6R6 413 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms