RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CDH6P55285 790 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 SH3BP2P78314 561 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CMPK2Q5EBM0 449 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 SPECC1Q5M775 1068 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 COL13A1Q5TAT6 717 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ADGRD1Q6QNK2 874 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 FKBP9P1Q75LS8 142 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 RAB11FIP4Q86YS3 637 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 SPATA4Q8NEY3 305 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ST13P5Q8NFI4 369 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TNIP2Q8NFZ5 429 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ARHGEF2Q92974 986 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CABS1Q96KC9 395 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ERP44Q9BS26 406 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 THAP2Q9H0W7 228 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 C8orf33Q9H7E9 229 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 NLRC4Q9NPP4 1024 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 INTS10Q9NVR2 710 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 INSL5Q9Y5Q6 135 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 DOCK8Q8NF50 2099 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 BIRC5O15392 142 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 MAFKO60675 156 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 HUS1O60921 280 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CLDN11O75508 207 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TFE3P19532 575 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 MX2P20592 715 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TARSP26639 723 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CASP1P29466 404 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 KLK7P49862 253 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 YWHAZP63104 245 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 PSPHP78330 225 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 PRKCQQ04759 706 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 SPA17Q15506 151 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 GGTA1PQ4G0N0 100 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 KIAA0930Q6ICG6 404 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CXorf57Q6NSI4 855 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 PMF1Q6P1K2 205 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 KCNT2Q6UVM3 1135 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 RANBP10Q6VN20 620 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TRIM69Q86WT6 500 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 SMYD4Q8IYR2 804 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 RIN3Q8TB24 985 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 DLG3Q92796 817 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 MYLPFQ96A32 169 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CHFRQ96EP1 664 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 PSKH2Q96QS6 385 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CCT7Q99832 543 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF385DQ9H6B1 395 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 RMI1Q9H9A7 625 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TLR8Q9NR97 1041 aaKnown RBP5.01□□□□□ -1.61
SCAF11-212ENST00000549162 TMEM30AQ9NV96 361 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 CEP83Q9Y592 693 aa5.01□□□□□ -1.61
SCAF11-212ENST00000549162 RASA4O43374 803 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 PIP5K1CO60331 668 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 DPM1O60762 260 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LTFP02788 710 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 FTLP02792 175 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 RPLP1P05386 114 aaKnown RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 GCAP28676 217 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CD52P31358 61 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 PBX3P40426 434 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CASP2P42575 452 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CCNHP51946 323 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 AP1S1P61966 158 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 MTSS1LQ765P7 747 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 VASH1Q7L8A9 365 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 LINC00523Q86TU6 105 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LRRTM3Q86VH5 581 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 GALNT12Q8IXK2 581 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CLUHP3Q96NS8 147 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 TASP1Q9H6P5 420 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ABCB8Q9NUT2 735 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LUZP4Q9P127 313 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 VPS28Q9UK41 221 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 WDR27A2RRH5 827 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LRRIQ4A6NIV6 560 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 I6L893 689 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 LILRA1O75019 489 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 AP2A1O95782 977 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 FGBP02675 491 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 VTNP04004 478 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 PGRP06401 933 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 TNFAIP3P21580 790 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 HOXD9P28356 352 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 CD86P42081 329 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CCR5P51681 352 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 IKQ13123 557 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 CAMK4Q16566 473 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 HADHQ16836 314 aaKnown RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 LONRF1Q17RB8 773 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SPANXN3Q5MJ09 141 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 DLK2Q6UY11 383 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LPCAT2Q7L5N7 544 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 PDILTQ8N807 584 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 VPS37AQ8NEZ2 397 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms