RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CEP44Q9C0F1 390 aa11.66□□□□□ -0.54
BEST3-209ENST00000548658 SERGEFQ9UGK8 458 aa11.66□□□□□ -0.54
BEST3-209ENST00000548658 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
BEST3-209ENST00000548658 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
BEST3-209ENST00000548658 A0A0D9SEW6 157 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 FAM170AA1A519 330 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 CBX4O00257 560 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 PLRG1O43660 514 aaKnown RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 BNIP3LO60238 219 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 RHOQP17081 205 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 TNFAIP3P21580 790 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 GPD1P21695 349 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 CD38P28907 300 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 CHRNA3P32297 505 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 RFC1P35251 1148 aaPredicted RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 DRD3P35462 400 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 MAPKAPK2P49137 400 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 NUMBP49757 651 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 TPM4P67936 248 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 GNA12Q03113 381 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 PTP4A2Q12974 167 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 C15orf59Q2T9L4 293 aaPredicted RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 INAVAQ3KP66 663 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 ACAD10Q6JQN1 1059 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 RWDD4Q6NW29 188 aaKnown RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 CAVIN1Q6NZI2 390 aaKnown RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 DNAJC24Q6P3W2 148 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 OR2A12Q8NGT7 310 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 JOSD2Q8TAC2 188 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 SETD7Q8WTS6 366 aaKnown RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 FAM172AQ8WUF8 416 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 NTAN1Q96AB6 310 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 PPP1R16AQ96I34 528 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 PSMB7Q99436 277 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 ORAI3Q9BRQ5 295 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 ATP13A1Q9HD20 1204 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 DYRK4Q9NR20 520 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 AASDHPPTQ9NRN7 309 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 DONSONQ9NYP3 566 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 DMTF1Q9Y222 760 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
BEST3-209ENST00000548658 SNX11Q9Y5W9 270 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 SNX10Q9Y5X0 201 aa11.65□□□□□ -0.54
BEST3-209ENST00000548658 SPAARA0A1B0GVQ0 90 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 A0A1W2PQC6 194 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 C10orf142B7Z368 130 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 YKT6O15498 198 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 LATO43561 262 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 SNAP91O60641 907 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 RNGTTO60942 597 aaKnown RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 MT-CO1P00395 513 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PLEKP08567 350 aaPredicted RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 L1CAMP32004 1257 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 CTSKP43235 329 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 CCT8P50990 548 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 ZNF143P52747 638 aaPredicted RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 HDAC4P56524 1084 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 BNC1Q01954 994 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 SCAPQ12770 1279 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 CNTN1Q12860 1018 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 OVGP1Q12889 678 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 DCUN1D2Q6PH85 259 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 MON1BQ7L1V2 547 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 SLFN11Q7Z7L1 901 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PHLDB2Q86SQ0 1253 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 TRIM69Q86WT6 500 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PCDH20Q8N6Y1 951 aaKnown RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 TBC1D31Q96DN5 1066 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 SERAC1Q96JX3 654 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PREBQ9HCU5 417 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 TMEM248Q9NWD8 314 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 ZNF212Q9UDV6 495 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 PCOLCE2Q9UKZ9 415 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 SARDHQ9UL12 918 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 WASF3Q9UPY6 502 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 FNDC3AQ9Y2H6 1198 aaKnown RBP11.64□□□□□ -0.55
BEST3-209ENST00000548658 NEUROG3Q9Y4Z2 214 aa11.64□□□□□ -0.55
BEST3-209ENST00000548658 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 ACACBO00763 2458 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 KNL1Q8NG31 2342 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
BEST3-209ENST00000548658 K7ERQ8 282 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 KPNA3O00505 521 aaPredicted RBP11.63□□□□□ -0.55
BEST3-209ENST00000548658 TEX33O43247 280 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 RTN2O75298 545 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 LRIG2O94898 1065 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 SERPINC1P01008 464 aa11.63□□□□□ -0.55
BEST3-209ENST00000548658 GZMAP12544 262 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms