RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CDK17Q00537 523 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 KCNMA1Q12791 1236 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 NME3Q13232 169 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 MEA1Q16626 185 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 ZNF284Q2VY69 593 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 FAM183BPQ6ZVS7 135 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 CHST14Q8NCH0 376 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 OR4C6Q8NH72 309 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 KLHDC7BQ96G42 594 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 PSMB7Q99436 277 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 CALN1Q9BXU9 219 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 PREBQ9HCU5 417 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 SLC12A6Q9UHW9 1150 aa16.89■□□□□ 0.29
SSH1-208ENST00000548522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 LY6G6EA0A0G2JKS1 128 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 TK2O00142 265 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 BIN1O00499 593 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 KPNA3O00505 521 aaPredicted RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 ALOX15BO15296 676 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 MED7O43513 233 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 MAGEC1O60732 1142 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 PAGE1O75459 146 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 TFE3P19532 575 aaPredicted RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 RRM1P23921 792 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 NUDT1P36639 197 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 ZNF177Q13360 481 aaPredicted RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 ALFQ53S48 1182 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 ZNF542PQ5EBM4 170 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 SEL1L3Q68CR1 1132 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 OLFML1Q6UWY5 402 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 LINGO4Q6UY18 593 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 GCNT7Q6ZNI0 430 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 GPR155Q7Z3F1 870 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 OR2A12Q8NGT7 310 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 GRIN3AQ8TCU5 1115 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 KLHL11Q9NVR0 708 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 ZFR2Q9UPR6 939 aaKnown RBP16.88■□□□□ 0.29
SSH1-208ENST00000548522 HS3ST2Q9Y278 367 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSH1-208ENST00000548522 U3KQA8 63 aa16.88■□□□□ 0.29
SSH1-208ENST00000548522 FAM170AA1A519 330 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 HSF2BPO75031 334 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 PIAS2O75928 621 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 NEBLO76041 1014 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 ERBB2P04626 1255 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 SLC2A3P11169 496 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 ACTN2P35609 894 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 USP8P40818 1118 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 HORMAD1Q86X24 394 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 CACTIN-AS1Q8N1I8 211 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
SSH1-208ENST00000548522 PPP1R13BQ96KQ4 1090 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 LGMNQ99538 433 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 SIK2Q9H0K1 926 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 MUC3BQ9H195 1237 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 VPS51Q9UID3 782 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 AJAP1Q9UKB5 411 aaPredicted RBP16.87■□□□□ 0.29
SSH1-208ENST00000548522 TBC1D30Q9Y2I9 924 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 SHROOM3Q8TF72 1996 aa16.87■□□□□ 0.29
SSH1-208ENST00000548522 A0A0D9SEW6 157 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 OPA1O60313 960 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 CHRNA3P32297 505 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 OXCT1P55809 520 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
SSH1-208ENST00000548522 ARHGAP44Q17R89 818 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 ZSCAN23Q3MJ62 389 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 CDCP2Q5VXM1 449 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 ZNF683Q8IZ20 524 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 ATP11CQ8NB49 1132 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 HIC2Q96JB3 615 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 APOLD1Q96LR9 279 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 TNKS2Q9H2K2 1166 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 CPNE5Q9HCH3 593 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 TMPRSS4Q9NRS4 437 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 PIGVQ9NUD9 493 aa16.86■□□□□ 0.29
SSH1-208ENST00000548522 TEX51A0A1B0GUA7 166 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 M0QYT0 321 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 CLDN11O75508 207 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 DAB1O75553 588 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 ENDOD1O94919 500 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 ADCY5O95622 1261 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 RHOCP08134 193 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 GLI1P08151 1106 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SSH1-208ENST00000548522 CKMT1AP12532 417 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 SLC9A1P19634 815 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 HNRNPA2B1P22626 353 aaKnown RBP16.85■□□□□ 0.29
SSH1-208ENST00000548522 GABREP78334 506 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 E2F1Q01094 437 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 MORC3Q14149 939 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 FGL2Q14314 439 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 C5orf22Q49AR2 442 aa16.85■□□□□ 0.29
SSH1-208ENST00000548522 PTPN20Q4JDL3 420 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms