RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TARSL2A2RTX5 802 aaKnown RBP29.35■■■□□ 2.29
BRF1-213ENST00000548421 ZSCAN5CA6NGD5 496 aaPredicted RBP29.35■■■□□ 2.29
BRF1-213ENST00000548421 TULP3O75386 442 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 DMC1Q14565 340 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 TEX44Q53QW1 395 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 KIAA0907Q7Z7F0 614 aaPredicted RBP29.35■■■□□ 2.29
BRF1-213ENST00000548421 TTC8Q8TAM2 541 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 CCDC110Q8TBZ0 833 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 CEP41Q9BYV8 373 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 PAK5Q9P286 719 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 VPS51Q9UID3 782 aa29.35■■■□□ 2.29
BRF1-213ENST00000548421 INTS6Q9UL03 887 aaKnown RBP29.35■■■□□ 2.29
BRF1-213ENST00000548421 MYO18AQ92614 2054 aaKnown RBP29.35■■■□□ 2.29
BRF1-213ENST00000548421 SNAP91O60641 907 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 OPHN1O60890 802 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ZMPSTE24O75844 475 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 JCHAINP01591 159 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 CISD3P0C7P0 127 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 GJA4P35212 333 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 VPS41P49754 854 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 RENBPP51606 427 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ARF5P84085 180 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 GUCY2DQ02846 1103 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 FUT11Q495W5 492 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ANKRD20A2Q5SQ80 823 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 TMCO4Q5TGY1 634 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ANKRD20A1Q5TYW2 823 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ANKRD20A3Q5VUR7 823 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 C4orf22Q6V702 233 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 AHI1Q8N157 1196 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 ZNF567Q8N184 647 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 CSGALNACT1Q8TDX6 532 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 IL12RB2Q99665 862 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 KLHL8Q9P2G9 620 aaPredicted RBP29.34■■■□□ 2.29
BRF1-213ENST00000548421 DEC1Q9P2X7 70 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 UBA2Q9UBT2 640 aaPredicted RBP29.34■■■□□ 2.29
BRF1-213ENST00000548421 TRHDEQ9UKU6 1024 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 SLC27A6Q9Y2P4 619 aa29.34■■■□□ 2.29
BRF1-213ENST00000548421 RPL22P35268 128 aaKnown RBP29.33■■■□□ 2.29
BRF1-213ENST00000548421 MARC1Q5VT66 337 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 DUPD1Q68J44 220 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 ARHGEF18Q6ZSZ5 1173 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 SLC44A3Q8N4M1 653 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 TRIM31Q9BZY9 425 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 ANKZF1Q9H8Y5 726 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 COL4A2P08572 1712 aa29.33■■■□□ 2.29
BRF1-213ENST00000548421 MYO10Q9HD67 2058 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 TRIM24O15164 1050 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 CTIFO43310 598 aaKnown RBP29.32■■■□□ 2.28
BRF1-213ENST00000548421 NEBLO76041 1014 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 GPS1Q13098 491 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 RFTN1Q14699 578 aaPredicted RBP29.32■■■□□ 2.28
BRF1-213ENST00000548421 LBRQ14739 615 aaKnown RBP29.32■■■□□ 2.28
BRF1-213ENST00000548421 GRAMD4Q6IC98 578 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 RETSATQ6NUM9 610 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 LEKR1Q6ZMV7 388 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 WFIKKN2Q8TEU8 576 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 USP33Q8TEY7 942 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 EPC1Q9H2F5 836 aa29.32■■■□□ 2.28
BRF1-213ENST00000548421 RBM22Q9NW64 420 aaKnown RBP eCLIP29.32■■■□□ 2.288e-8■□□□□ 9
BRF1-213ENST00000548421 COL6A3P12111 3177 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 CXorf51AA0A1B0GTR3 108 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 LOC730098B7Z3J9 87 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 ADCY8P40145 1251 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 EIF2DP41214 584 aaKnown RBP29.31■■■□□ 2.28
BRF1-213ENST00000548421 SLC6A11P48066 632 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 GEMIN4P57678 1058 aaKnown RBP29.31■■■□□ 2.28
BRF1-213ENST00000548421 SLC10A7Q0GE19 358 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 FAM182AQ5T1J6 154 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 PID1Q7Z2X4 250 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 TEX26Q8N6G2 289 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 GPR161Q8N6U8 529 aaKnown RBP29.31■■■□□ 2.28
BRF1-213ENST00000548421 SEC14L1Q92503 715 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 RUBCNQ92622 972 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 ZNF419Q96HQ0 510 aaPredicted RBP29.31■■■□□ 2.28
BRF1-213ENST00000548421 TEKT5Q96M29 485 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 AGAP3Q96P47 875 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 HINFPQ9BQA5 517 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 EPB41L5Q9HCM4 733 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 TRPV5Q9NQA5 729 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 THEGQ9P2T0 379 aa29.31■■■□□ 2.28
BRF1-213ENST00000548421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.3■■■□□ 2.28
BRF1-213ENST00000548421 BHMG1C9JSJ3 638 aaPredicted RBP29.3■■■□□ 2.28
BRF1-213ENST00000548421 ASGR2P07307 311 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 MMP13P45452 471 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 SULT2A1Q06520 285 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 GEN1Q17RS7 908 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 ITPRIPL1Q6GPH6 555 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 ADIPOR2Q86V24 386 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 LRRC45Q96CN5 670 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 DPH5Q9H2P9 285 aa29.3■■■□□ 2.28
BRF1-213ENST00000548421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 OPRD1P41143 372 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 NAA30Q147X3 362 aaPredicted RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 LINGO4Q6UY18 593 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 IFT20Q8IY31 132 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 BBS5Q8N3I7 341 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 CNTD1Q8N815 330 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 DNASE1L2Q92874 299 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 SNF8Q96H20 258 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms