RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 ITPKAP23677 461 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 SLC8A1P32418 973 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 SERPINH1P50454 418 aaKnown RBP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 PUM1Q14671 1186 aaKnown RBP eCLIP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 FAM46CQ5VWP2 391 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 PCDH20Q8N6Y1 951 aaKnown RBP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 C12orf50Q8NA57 414 aaPredicted RBP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 TMIEQ8NEW7 156 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 OR2A12Q8NGT7 310 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 C1orf216Q8TAB5 229 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 CASKIN2Q8WXE0 1202 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 OR8D1Q8WZ84 308 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 PIGKQ92643 395 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 MRFAP1L1Q96HT8 127 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 CCDC114Q96M63 670 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 HSPA12BQ96MM6 686 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 PEBP4Q96S96 227 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 SNRNP25Q9BV90 132 aaKnown RBP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 GPR174Q9BXC1 333 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 TRIM5Q9C035 493 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 KDM4CQ9H3R0 1056 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 MYO1AQ9UBC5 1043 aa23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 CNOT1A5YKK6 2376 aaKnown RBP23.79■■□□□ 1.4
CTDSP2-203ENST00000547701 KNL1Q8NG31 2342 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 SLC30A4O14863 429 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 SLC7A4O43246 635 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 KDELR3O43731 214 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 SERPINF2P08697 491 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 H2AFZP0C0S5 128 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 VAV1P15498 845 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 ACSL1P33121 698 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 POLD3Q15054 466 aaPredicted RBP23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 SF3A2Q15428 464 aaKnown RBP23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 DPYSL2Q16555 572 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 PARP15Q460N3 678 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 H2AFVQ71UI9 128 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 MMAAQ8IVH4 418 aaKnown RBP23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 ATP11CQ8NB49 1132 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 TEKT4Q8WW24 435 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 RMDN1Q96DB5 314 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 RTKNQ9BST9 563 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 CAPN10Q9HC96 672 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 FBXL12Q9NXK8 326 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 FARP1Q9Y4F1 1045 aaPredicted RBP23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 PCDH15Q96QU1 1955 aa23.78■■□□□ 1.4
CTDSP2-203ENST00000547701 AKR1B15C9JRZ8 316 aaPredicted RBP23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 MID1O15344 667 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 SEMA4FO95754 770 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 ID4P47928 161 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 NDST2P52849 883 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 GFPT1Q06210 699 aaPredicted RBP23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 ACCSLQ4AC99 568 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 INO80DQ53TQ3 878 aaPredicted RBP23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 NUP85Q9BW27 656 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 RBSNQ9H1K0 784 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 DNAI1Q9UI46 699 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 HPCAL4Q9UM19 191 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 SLC6A14Q9UN76 642 aa23.77■■□□□ 1.4
CTDSP2-203ENST00000547701 LNP1A1A4G5 178 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 MYO1FO00160 1098 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 CBX4O00257 560 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 TM4SF5O14894 197 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 SMAD6O43541 496 aaKnown RBP23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 TMEM253P0C7T8 217 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 GLDCP23378 1020 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 DRD3P35462 400 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 ACVRL1P37023 503 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 ADKP55263 362 aaKnown RBP23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 TCEAL1Q15170 157 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 RSPO4Q2I0M5 234 aaPredicted RBP23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 AFMIDQ63HM1 303 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 IL31Q6EBC2 164 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 C22orf39Q6P5X5 142 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 Q6ZVU0 165 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 AADATQ8N5Z0 425 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 FAM71BQ8TC56 605 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 ARHGEF26Q96DR7 871 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 CHP1Q99653 195 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 SPON2Q9BUD6 331 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 LRRC19Q9H756 370 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 NHEJ1Q9H9Q4 299 aaPredicted RBP23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 INTUQ9ULD6 942 aa23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.76■■□□□ 1.39
CTDSP2-203ENST00000547701 ASCC3Q8N3C0 2202 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 C1QTNF3-AMACRE9PGA6 284 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 K7ERQ8 282 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 CREB3O43889 395 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 GNSP15586 552 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 TPI1P60174 286 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 IRX4P78413 519 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 CA9Q16790 459 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 TRIM61Q5EBN2 209 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 DCAF12L1Q5VU92 463 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 TC2NQ8N9U0 490 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 OR2T34Q8NGX1 318 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 LRIG1Q96JA1 1093 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 CCDC42Q96M95 316 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 NUSAP1Q9BXS6 441 aaKnown RBP23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 KLC2Q9H0B6 622 aa23.75■■□□□ 1.39
CTDSP2-203ENST00000547701 NEUROG2Q9H2A3 272 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms