RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RPUSD3Q6P087 351 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 MSANTD2Q6P1R3 559 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 FAM47EQ6ZV65 393 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 ADGRG6Q86SQ4 1221 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CCDC105Q8IYK2 499 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CNTROBQ8N137 903 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SAAL1Q96ER3 474 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 PPP1R10Q96QC0 940 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 WDR24Q96S15 920 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CD180Q99467 661 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 MACROD1Q9BQ69 325 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 MECRQ9BV79 373 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SPRTNQ9H040 489 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 USP44Q9H0E7 712 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 OR10A4Q9H209 315 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SMARCAD1Q9H4L7 1026 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 MROH8Q9H579 483 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 RABEP2Q9H5N1 569 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 GBA2Q9HCG7 927 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 FBXO28Q9NVF7 368 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 BEX4Q9NWD9 120 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 LIMA1Q9UHB6 759 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF580Q9UK33 172 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SARDHQ9UL12 918 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF608Q9ULD9 1512 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SOS1Q07889 1333 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 QSOX1O00391 747 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 GJB3O75712 270 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 NR2F1P10589 423 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TGFB3P10600 412 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 DRD1P21728 446 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 EPHA3P29320 983 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 GCH1P30793 250 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ACSL1P33121 698 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ABCD1P33897 745 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 HADHAP40939 763 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ARHGAP25P42331 645 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 DPP6P42658 865 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PCP4P48539 62 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 GATMP50440 423 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CDH15P55291 814 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 GOLGA8DPQ0D2H9 430 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PTP4A2Q12974 167 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 LAMB3Q13751 1172 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CCNIQ14094 377 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 SCARB2Q14108 478 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 E2F2Q14209 437 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PRICKLE4Q2TBC4 344 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PTCHD3Q3KNS1 767 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 RUNDC3AQ59EK9 446 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TMEM196Q5HYL7 178 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 AARS2Q5JTZ9 985 aaKnown RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 C1orf141Q5JVX7 400 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TREML2Q5T2D2 321 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ARHGAP40Q5TG30 622 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ANKRD40Q6AI12 368 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 RGS7BPQ6MZT1 257 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TMEM154Q6P9G4 183 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 WDR53Q7Z5U6 358 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 NDUFAF2Q8N183 169 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF713Q8N859 430 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PTGR2Q8N8N7 351 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 KCTD6Q8NC69 237 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 MSANTD4Q8NCY6 345 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 LSM14AQ8ND56 463 aaKnown RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TMEM171Q8WVE6 324 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 IGFBPL1Q8WX77 278 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 GLG1Q92896 1179 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CTHRC1Q96CG8 243 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 FAR2Q96K12 515 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 JAKMIP1Q96N16 626 aaKnown RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 LENG8Q96PV6 779 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 PHF7Q9BWX1 381 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 EDEM3Q9BZQ6 932 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 IL21RQ9HBE5 538 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 KCND2Q9NZV8 630 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 MORF4L1Q9UBU8 362 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CORO1CQ9ULV4 474 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 DRG1Q9Y295 367 aaKnown RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 ZBTB1Q9Y2K1 713 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 UBE2J1Q9Y385 318 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-210ENST00000547654 CEP164Q9UPV0 1460 aa4.55□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3DA0A087WVF3 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3IA0A087WXS9 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3EA0A087X179 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3KA0A087X1G2 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 A1L4Q6 167 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3BA6NDS4 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3FA6NER0 549 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TRIM64A6NGJ6 449 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 GAGE10A6NGK3 116 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 NPIPB15A6NHN6 443 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TRIM64BA6NI03 449 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 TBC1D3LB9A6J9 549 aa4.54□□□□□ -1.68
SCAF11-210ENST00000547654 HNRNPCL1O60812 293 aaKnown RBP4.54□□□□□ -1.68
SCAF11-210ENST00000547654 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms