RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 OXCT1P55809 520 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CDK17Q00537 523 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CDCP2Q5VXM1 449 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 C11orf57Q6ZUT1 292 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 ABI3BPQ7Z7G0 1075 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CCDC117Q8IWD4 279 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 CHST14Q8NCH0 376 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 PGAP3Q96FM1 320 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 TMPRSS4Q9NRS4 437 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
COPS7A-221ENST00000546229 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SNX10Q9Y5X0 201 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
COPS7A-221ENST00000546229 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 A0A0D9SEW6 157 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 DRGXA6NNA5 263 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 PRAMEF26H0Y7S4 382 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 RNGTTO60942 597 aaKnown RBP12.87□□□□□ -0.35
COPS7A-221ENST00000546229 ZMPSTE24O75844 475 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 PRB1P04280 392 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 JUPP14923 745 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 PRLRP16471 622 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 GLDCP23378 1020 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 DGKAP23743 735 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 NOS2P35228 1153 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
COPS7A-221ENST00000546229 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 ZNF211Q13398 564 aaPredicted RBP12.87□□□□□ -0.35
COPS7A-221ENST00000546229 FGL2Q14314 439 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 SETMARQ53H47 684 aaPredicted RBP12.87□□□□□ -0.35
COPS7A-221ENST00000546229 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
COPS7A-221ENST00000546229 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 OR13H1Q8NG92 308 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 FZD3Q9NPG1 666 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
COPS7A-221ENST00000546229 A0A1W2PNU3 283 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-221ENST00000546229 A0A1W2PQU0 124 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 C1QTNF3-AMACRE9PGA6 284 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 ATXN7O15265 892 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-221ENST00000546229 SPINT1O43278 529 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 PIAS2O75928 621 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 CD160O95971 181 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 RRM1P23921 792 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 NNMTP40261 264 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 SLC6A3Q01959 620 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 SEMG2Q02383 582 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 TLE3Q04726 772 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 NME3Q13232 169 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 MTA1Q13330 715 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 TPRG1LQ5T0D9 272 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 SEL1L3Q68CR1 1132 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 NEK5Q6P3R8 708 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 C22orf39Q6P5X5 142 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 SLC12A6Q9UHW9 1150 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 RWDD2AQ9UIY3 292 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
COPS7A-221ENST00000546229 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-221ENST00000546229 M0QYT0 321 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 RAD51BO15315 384 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 MAGEC1O60732 1142 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 CKMT1AP12532 417 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 CHRNA3P32297 505 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 SCNN1AP37088 669 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 GABRB2P47870 512 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 CLCN6P51797 869 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 NUCB2P80303 420 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-221ENST00000546229 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 MANEALQ5VSG8 457 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms