RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 VOPP1Q96AW1 172 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 EME1Q96AY2 570 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 HVCN1Q96D96 273 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.02□□□□□ -1.45
COPA-206ENST00000545266 LMAN2LQ9H0V9 348 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
COPA-206ENST00000545266 UBN1Q9NPG3 1134 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 GRHL1Q9NZI5 618 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 SLC25A10Q9UBX3 287 aaPredicted RBP6.02□□□□□ -1.45
COPA-206ENST00000545266 TBX20Q9UMR3 447 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 PCDHA12Q9UN75 941 aa6.02□□□□□ -1.45
COPA-206ENST00000545266 SETD1BQ9UPS6 1966 aaKnown RBP6.01□□□□□ -1.45
COPA-206ENST00000545266 LY6G6EA0A0G2JKS1 128 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 OR6C68A6NDL8 312 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 KLF9Q13886 244 aaPredicted RBP6.01□□□□□ -1.45
COPA-206ENST00000545266 SLC18A3Q16572 532 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 ZDHHC23Q8IYP9 409 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 SLC25A41Q8N5S1 370 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 ZCCHC10Q8TBK6 192 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 EIF2AK1Q9BQI3 630 aaKnown RBP6.01□□□□□ -1.45
COPA-206ENST00000545266 PNRC2Q9NPJ4 139 aaKnown RBP6.01□□□□□ -1.45
COPA-206ENST00000545266 ATP8A2Q9NTI2 1148 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 HEY2Q9UBP5 337 aa6.01□□□□□ -1.45
COPA-206ENST00000545266 WDR91A4D1P6 747 aa6□□□□□ -1.45
COPA-206ENST00000545266 GAGE10A6NGK3 116 aa6□□□□□ -1.45
COPA-206ENST00000545266 HBP1O60381 514 aa6□□□□□ -1.45
COPA-206ENST00000545266 MOSPD3O75425 235 aa6□□□□□ -1.45
COPA-206ENST00000545266 IFNA2P01563 188 aa6□□□□□ -1.45
COPA-206ENST00000545266 IFIT1P09914 478 aaKnown RBP6□□□□□ -1.45
COPA-206ENST00000545266 PRF1P14222 555 aa6□□□□□ -1.45
COPA-206ENST00000545266 XBP1P17861 261 aa6□□□□□ -1.45
COPA-206ENST00000545266 CIITAP33076 1130 aa6□□□□□ -1.45
COPA-206ENST00000545266 PGM1P36871 562 aa6□□□□□ -1.45
COPA-206ENST00000545266 LIFRP42702 1097 aa6□□□□□ -1.45
COPA-206ENST00000545266 TBX2Q13207 712 aaPredicted RBP6□□□□□ -1.45
COPA-206ENST00000545266 RBMS2Q15434 407 aaKnown RBP6□□□□□ -1.45
COPA-206ENST00000545266 TWIST1Q15672 202 aa6□□□□□ -1.45
COPA-206ENST00000545266 ENTPD8Q5MY95 495 aa6□□□□□ -1.45
COPA-206ENST00000545266 JAKMIP3Q5VZ66 844 aa6□□□□□ -1.45
COPA-206ENST00000545266 TMEM268Q5VZI3 342 aa6□□□□□ -1.45
COPA-206ENST00000545266 C17orf99Q6UX52 265 aa6□□□□□ -1.45
COPA-206ENST00000545266 TRIM74Q86UV6 250 aa6□□□□□ -1.45
COPA-206ENST00000545266 TRIM73Q86UV7 250 aa6□□□□□ -1.45
COPA-206ENST00000545266 ARFGAP1Q8N6T3 406 aa6□□□□□ -1.45
COPA-206ENST00000545266 ZNF366Q8N895 744 aa6□□□□□ -1.45
COPA-206ENST00000545266 KDM1BQ8NB78 822 aa6□□□□□ -1.45
COPA-206ENST00000545266 ZBTB10Q96DT7 871 aa6□□□□□ -1.45
COPA-206ENST00000545266 ELP4Q96EB1 424 aa6□□□□□ -1.45
COPA-206ENST00000545266 AGXT2Q9BYV1 514 aa6□□□□□ -1.45
COPA-206ENST00000545266 MROH8Q9H579 483 aa6□□□□□ -1.45
COPA-206ENST00000545266 SEMA4BQ9NPR2 832 aaPredicted RBP6□□□□□ -1.45
COPA-206ENST00000545266 BEX4Q9NWD9 120 aaPredicted RBP6□□□□□ -1.45
COPA-206ENST00000545266 HCN3Q9P1Z3 774 aa6□□□□□ -1.45
COPA-206ENST00000545266 NLKQ9UBE8 527 aa6□□□□□ -1.45
COPA-206ENST00000545266 CNOT7Q9UIV1 285 aaKnown RBP6□□□□□ -1.45
COPA-206ENST00000545266 PCSK5Q92824 1860 aa6□□□□□ -1.45
COPA-206ENST00000545266 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.99□□□□□ -1.45
COPA-206ENST00000545266 GAGE12JA6NER3 117 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 TEX22C9J3V5 150 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 OVOL3O00110 214 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 RNMTO43148 476 aaKnown RBP5.99□□□□□ -1.45
COPA-206ENST00000545266 STRNO43815 780 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 SERPINC1P01008 464 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 HNRNPA1P09651 372 aaKnown RBP eCLIP5.99□□□□□ -1.45
COPA-206ENST00000545266 SKIV2L2P42285 1042 aaKnown RBP5.99□□□□□ -1.45
COPA-206ENST00000545266 MMP13P45452 471 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 NR1H2P55055 460 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 CAMK1Q14012 370 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 ALG10Q5BKT4 473 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 ZNF766Q5HY98 468 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 ALG10BQ5I7T1 473 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 C6orf10Q5SRN2 563 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 SLC9C2Q5TAH2 1124 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 WDR5BQ86VZ2 330 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 FAM185AQ8N0U4 392 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 DENND1AQ8TEH3 1009 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 ST8SIA4Q92187 359 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 IFT27Q9BW83 186 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 EPHX3Q9H6B9 360 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 JMJD4Q9H9V9 463 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 TRNAU1APQ9NX07 287 aaKnown RBP5.99□□□□□ -1.45
COPA-206ENST00000545266 PPP1R14DQ9NXH3 145 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 DHDHQ9UQ10 334 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 CYP46A1Q9Y6A2 500 aa5.99□□□□□ -1.45
COPA-206ENST00000545266 C17orf113A0A1B0GUU1 675 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 A6NLC8 198 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 A6NNC1 897 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 PPEF2O14830 753 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 EPN2O95208 641 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 UNGP13051 313 aaPredicted RBP5.98□□□□□ -1.45
COPA-206ENST00000545266 KLRC2P26717 231 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 PTPN9P43378 593 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 INPP5JQ15735 1006 aaPredicted RBP5.98□□□□□ -1.45
COPA-206ENST00000545266 SYTL3Q4VX76 610 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 PXDC1Q5TGL8 231 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 ZNF425Q6IV72 752 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 SHC4Q6S5L8 630 aa5.98□□□□□ -1.45
COPA-206ENST00000545266 MRPL10Q7Z7H8 261 aaKnown RBP5.98□□□□□ -1.45
COPA-206ENST00000545266 CCDC25Q86WR0 208 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms