RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TFAP2BQ92481 460 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 SERPINB11Q96P15 392 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 SEMA3CQ99985 751 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 ZSWIM1Q9BR11 485 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 RAB20Q9NX57 234 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 NAALADL1Q9UQQ1 740 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TLR6Q9Y2C9 796 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 PCDHGA7Q9Y5G6 932 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 SPENQ96T58 3664 aaKnown RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 SPTY2D1-AS1A0A0U1RR47 76 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CLEC18AA5D8T8 446 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 A6NNZ2 444 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 PLD2O14939 933 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ALOX15BO15296 676 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 SPINT1O43278 529 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 AQP9O43315 295 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 CALUO43852 315 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 CALCAP01258 141 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 KRT13P13646 458 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 HGFP14210 728 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ZNF18P17022 549 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 GTF2H1P32780 548 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 UGT1A5P35504 534 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 MXI1P50539 228 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 IRAK1P51617 712 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 MCCD1P59942 119 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 CYP4F2P78329 520 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 SULT2A1Q06520 285 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ENPEPQ07075 957 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 NNTQ13423 1086 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CUL2Q13617 745 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CLCA4Q14CN2 919 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 NR0B2Q15466 257 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 SYPL2Q5VXT5 272 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 LCLAT1Q6UWP7 414 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CLEC18BQ6UXF7 455 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 C14orf80Q86SX3 495 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 VASH2Q86V25 355 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 JAMLQ86YT9 394 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 RBFAQ8N0V3 343 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CLEC18CQ8NCF0 446 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 LMX1AQ8TE12 382 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ERCC4Q92889 916 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 LIN37Q96GY3 246 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 PRMT1Q99873 361 aaKnown RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 BOCQ9BWV1 1114 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 MIS12Q9H081 205 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 TCEAL2Q9H3H9 227 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 ZSCAN16Q9H4T2 348 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 ACSL6Q9UKU0 697 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 PNMA8BQ9ULN7 279 aaPredicted RBP9.64□□□□□ -0.87
CHD4-212ENST00000545083 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 CREBBPQ92793 2442 aa9.64□□□□□ -0.87
CHD4-212ENST00000545083 KPNA3O00505 521 aaPredicted RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 NTN3O00634 580 aaPredicted RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 PPFIA2O75334 1257 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 GCATO75600 419 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 PCDH8O95206 1070 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 MT-CO1P00395 513 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 VDRP11473 427 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 PITX1P78337 314 aaPredicted RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 EIF2B5Q13144 721 aaKnown RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 C1orf61Q13536 156 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 SLC12A1Q13621 1099 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 IGFBP7Q16270 282 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 NFIL3Q16649 462 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 CBWD6Q4V339 395 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 CBWD3Q5JTY5 395 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 CBWD5Q5RIA9 395 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 RESP18Q5W5W9 173 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 HIST2H2BCQ6DN03 193 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 KYAT3Q6YP21 454 aaKnown RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 PARGQ86W56 976 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 PTRH1Q86Y79 214 aaKnown RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 DCP2Q8IU60 420 aaKnown RBP9.63□□□□□ -0.87
CHD4-212ENST00000545083 FBXO39Q8N4B4 442 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 CHST14Q8NCH0 376 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 OR2A12Q8NGT7 310 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 PAGE5Q96GU1 130 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 PPP1R13BQ96KQ4 1090 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 IL12RB2Q99665 862 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 CCDC3Q9BQI4 270 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 FUCA2Q9BTY2 467 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 SLC25A18Q9H1K4 315 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 EPN3Q9H201 632 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 SYNDIG1Q9H7V2 258 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 NCKIPSDQ9NZQ3 722 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms