RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 MPP3Q13368 585 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 POLD3Q15054 466 aaPredicted RBP16.33■□□□□ 0.21
SPDEF-202ENST00000544425 PDK4Q16654 411 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 ANKRD20A4Q4UJ75 823 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 CERCAMQ5T4B2 595 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 MARC1Q5VT66 337 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 HHATQ5VTY9 493 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 LVRNQ6Q4G3 990 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 DNAJB7Q7Z6W7 309 aaPredicted RBP16.33■□□□□ 0.21
SPDEF-202ENST00000544425 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.21
SPDEF-202ENST00000544425 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.33■□□□□ 0.21
SPDEF-202ENST00000544425 CERS2Q96G23 380 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 TBL1YQ9BQ87 522 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 KIFC1Q9BW19 673 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 VPS11Q9H270 941 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 UGT1A7Q9HAW7 530 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 UGT1A10Q9HAW8 530 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 UGT1A8Q9HAW9 530 aa16.33■□□□□ 0.21
SPDEF-202ENST00000544425 ZCWPW2A0A1B0GU75 182 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 HMX2A2RU54 273 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 J3KR12 359 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 MT-CYBP00156 380 aaPredicted RBP16.33■□□□□ 0.2
SPDEF-202ENST00000544425 OR1E1P30953 314 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 FOXN2P32314 431 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 SERINC3Q13530 473 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 SEPT7Q16181 437 aaKnown RBP16.33■□□□□ 0.2
SPDEF-202ENST00000544425 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
SPDEF-202ENST00000544425 RANBP10Q6VN20 620 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 UNC5BQ8IZJ1 945 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 NSMCE1Q8WV22 266 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 GRAMD1AQ96CP6 724 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.2
SPDEF-202ENST00000544425 TMEM106CQ9BVX2 250 aa16.33■□□□□ 0.2
SPDEF-202ENST00000544425 ZNF638Q14966 1978 aaKnown RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 GOLGA8RI6L899 631 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 PRRG1O14668 218 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 OAS1P00973 400 aaKnown RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 EPHB3P54753 998 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 TWF1Q12792 350 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 ITIH4Q14624 930 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 PCID2Q5JVF3 399 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 DENND5AQ6IQ26 1287 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 POTEHQ6S545 545 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 LGI2Q8N0V4 545 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 CCDC197Q8NCU1 140 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 ACMSDQ8TDX5 336 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 PTCD2Q8WV60 388 aaKnown RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 CABS1Q96KC9 395 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 KLF6Q99612 283 aaPredicted RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 KLF16Q9BXK1 252 aaPredicted RBP16.32■□□□□ 0.2
SPDEF-202ENST00000544425 SP110Q9HB58 689 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 ARNT2Q9HBZ2 717 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 VPS45Q9NRW7 570 aa16.32■□□□□ 0.2
SPDEF-202ENST00000544425 TEX28O15482 410 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ATP9BO43861 1147 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 SNX3O60493 162 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 STC2O76061 302 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 DHRS4L1P0CG22 281 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 CTSAP10619 480 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ALADP13716 330 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 SLC6A4P31645 630 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ETV4P43268 484 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 CDH4P55283 916 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 GRTP1Q5TC63 336 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 C16orf59Q7L2K0 433 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 SRLQ86TD4 932 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ZNF669Q96BR6 464 aaPredicted RBP16.31■□□□□ 0.2
SPDEF-202ENST00000544425 MYEOVQ96EZ4 313 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 IMP4Q96G21 291 aaKnown RBP16.31■□□□□ 0.2
SPDEF-202ENST00000544425 MRGPRX2Q96LB1 330 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ZNF599Q96NL3 588 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 CPNE1Q99829 537 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ELAC2Q9BQ52 826 aaKnown RBP16.31■□□□□ 0.2
SPDEF-202ENST00000544425 APOL2Q9BQE5 337 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 RNF38Q9H0F5 515 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ZBP1Q9H171 429 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 MAGEH1Q9H213 219 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ZFATQ9P243 1243 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 GRID1Q9ULK0 1009 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 ASB3Q9Y575 518 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 INSL5Q9Y5Q6 135 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 GREB1Q4ZG55 1949 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 COPEO14579 308 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 FGF18O76093 207 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 GP5P40197 560 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 SLC10A7Q0GE19 358 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 PLD1Q13393 1074 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 PABPC1LQ4VXU2 614 aaKnown RBP16.31■□□□□ 0.2
SPDEF-202ENST00000544425 RABGAP1LQ5R372 815 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 MROH9Q5TGP6 573 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 CES3Q6UWW8 571 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 FIBCD1Q8N539 461 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 IPMKQ8NFU5 416 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 AUTS2Q8WXX7 1259 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms