RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PAPOLAP51003 745 aaKnown RBP15.41■□□□□ 0.06
CD9-210ENST00000543916 NRLP54845 237 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 DLG2Q15700 870 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
CD9-210ENST00000543916 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 NCBP2-AS2Q69YL0 99 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 RETSATQ6NUM9 610 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 MFSD7Q6UXD7 560 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 ARHGAP36Q6ZRI8 547 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 Q6ZVU0 165 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 NT5DC3Q86UY8 548 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 LONP2Q86WA8 852 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 LZTR1Q8N653 840 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 PQLC3Q8N755 202 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
CD9-210ENST00000543916 MRGPRX1Q96LB2 322 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 PDFQ9HBH1 243 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 LZTFL1Q9NQ48 299 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 FAM86C1Q9NVL1 165 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 ZSCAN32Q9NX65 697 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 BCCIPQ9P287 314 aaKnown RBP eCLIP15.41■□□□□ 0.06
CD9-210ENST00000543916 HPCAL4Q9UM19 191 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 PPP2R2CQ9Y2T4 447 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 R4GN57 208 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 CCDC163A0A0D9SF12 145 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
CD9-210ENST00000543916 ARHGAP42A6NI28 874 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 J3KR12 359 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 DFFAO00273 331 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 FTCDO95954 541 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 SRSF5Q13243 272 aaKnown RBP15.4■□□□□ 0.06
CD9-210ENST00000543916 PAFAH1B3Q15102 231 aaKnown RBP15.4■□□□□ 0.06
CD9-210ENST00000543916 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 ZNF662Q6ZS27 426 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 VSIG1Q86XK7 387 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 CACUL1Q86Y37 369 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 PGBD3Q8N328 593 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 RNF10Q8N5U6 811 aaKnown RBP15.4■□□□□ 0.06
CD9-210ENST00000543916 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 RNF157Q96PX1 679 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 CD93Q9NPY3 652 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 FCF1Q9Y324 198 aaKnown RBP15.4■□□□□ 0.06
CD9-210ENST00000543916 PCDHGA2Q9Y5H1 932 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 PCDHA3Q9Y5H8 950 aa15.4■□□□□ 0.06
CD9-210ENST00000543916 SHROOM3Q8TF72 1996 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 CXorf51AA0A1B0GTR3 108 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 ZSCAN5CA6NGD5 496 aaPredicted RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 PRAMEF11O60813 436 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 LILRB5O75023 590 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 ZNF821O75541 412 aaPredicted RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 CTNNA2P26232 953 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 SERPINB6P35237 376 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 CDKN2BP42772 138 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 CLCN6P51797 869 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 SLC20A2Q08357 652 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 CCDC173Q0VFZ6 552 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 TAZQ16635 292 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 ODF2Q5BJF6 829 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 KIAA1324Q6UXG2 1013 aaKnown RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 SPOCD1Q6ZMY3 1216 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 TMPRSS6Q8IU80 811 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 SYCE1Q8N0S2 351 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 STK40Q8N2I9 435 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 ATOH1Q92858 354 aaPredicted RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 FAM129BQ96TA1 746 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 RSPH9Q9H1X1 276 aaPredicted RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 TNKS2Q9H2K2 1166 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 PRDM16Q9HAZ2 1276 aa15.39■□□□□ 0.05
CD9-210ENST00000543916 PACSIN2Q9UNF0 486 aaPredicted RBP15.39■□□□□ 0.05
CD9-210ENST00000543916 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 HRO43593 1189 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 BNIP3LO60238 219 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 TMCC1O94876 653 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 C7P10643 843 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 PEX5P50542 639 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 GEMIN4P57678 1058 aaKnown RBP15.38■□□□□ 0.05
CD9-210ENST00000543916 RPS14P62263 151 aaKnown RBP15.38■□□□□ 0.05
CD9-210ENST00000543916 GBE1Q04446 702 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 LLGL1Q15334 1064 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 SLC9A4Q6AI14 798 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 RFX6Q8HWS3 928 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 PLD5Q8N7P1 536 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 FRMD1Q8N878 549 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 OR2A12Q8NGT7 310 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 RLN3Q8WXF3 142 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 ALG3Q92685 438 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 SIPA1Q96FS4 1042 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 CEP44Q9C0F1 390 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 IRF2BPLQ9H1B7 796 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 FBRSQ9HAH7 460 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 INVSQ9Y283 1065 aa15.38■□□□□ 0.05
CD9-210ENST00000543916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.38■□□□□ 0.05
CD9-210ENST00000543916 DDX3YO15523 660 aaKnown RBP15.37■□□□□ 0.05
CD9-210ENST00000543916 ZBTB24O43167 697 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms