RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 HNRNPA2B1P22626 353 aaKnown RBP20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 AKT2P31751 481 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 CHRNA3P32297 505 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 TMPRSS3P57727 454 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 GABREP78334 506 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 PDCLQ13371 301 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 BROXQ5VW32 411 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 TTI2Q6NXR4 508 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 ABI3BPQ7Z7G0 1075 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 TMIEQ8NEW7 156 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 OR2A12Q8NGT7 310 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 NOX5Q96PH1 765 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 POLR1BQ9H9Y6 1135 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 USP29Q9HBJ7 922 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 FZD3Q9NPG1 666 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 ASNSD1Q9NWL6 643 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 NLGN3Q9NZ94 848 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 FARP1Q9Y4F1 1045 aaPredicted RBP20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 HS3ST4Q9Y661 456 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 SYNJ2BP-COX16A0A087WUM0 186 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 LY6G6EA0A0G2JKS1 128 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 NEMP2A6NFY4 417 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 J3QKU1 62 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 KPNA3O00505 521 aaPredicted RBP20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 SCAMP1O15126 338 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 FOXR2Q6PJQ5 311 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 C14orf80Q86SX3 495 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 TRIM59Q8IWR1 403 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 SLC22A18ASQ8N1D0 253 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 WDTC1Q8N5D0 677 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 FAM174AQ8TBP5 190 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 ARRDC3Q96B67 414 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 DUSP23Q9BVJ7 150 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 CALN1Q9BXU9 219 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 CPNE5Q9HCH3 593 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 UBE2TQ9NPD8 197 aaPredicted RBP20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 ACP6Q9NPH0 428 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 COX16Q9P0S2 106 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 ZFR2Q9UPR6 939 aaKnown RBP20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 HS3ST3A1Q9Y663 406 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 U3KQA8 63 aa20.45■□□□□ 0.86
LPCAT3-211ENST00000543794 NYNRINQ9P2P1 1898 aaKnown RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 THAP12O43422 761 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 LZTS3O60299 673 aaPredicted RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 CSO75390 466 aaKnown RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 MYF5P13349 255 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 GNA15P30679 374 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 PPP1R2P41236 205 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 DUSP3P51452 185 aaPredicted RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 CDH4P55283 916 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 CLDN2P57739 230 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 KRT83P78385 493 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 EFHC1Q5JVL4 640 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 ARHGAP40Q5TG30 622 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 GCNT7Q6ZNI0 430 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 Q6ZSR6 202 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 DCP2Q8IU60 420 aaKnown RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 ATP11CQ8NB49 1132 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 SNRNP27Q8WVK2 155 aaKnown RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 BMFQ96LC9 184 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 CCDC114Q96M63 670 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 PSMB7Q99436 277 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 DPH1Q9BZG8 443 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 INTS2Q9H0H0 1204 aaKnown RBP20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 ABCG4Q9H172 646 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 MUC3BQ9H195 1237 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 ASCL3Q9NQ33 180 aa20.44■□□□□ 0.86
LPCAT3-211ENST00000543794 K7ERQ8 282 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 K7ESM1 405 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 RNF103O00237 685 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 HSF2BPO75031 334 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 PAGE1O75459 146 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 PCDH8O95206 1070 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 PRNPP04156 253 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 TMEM259Q4ZIN3 620 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 ISM2Q6H9L7 571 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 IGF2-ASQ6U949 168 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 ERN2Q76MJ5 926 aaKnown RBP20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 KCNE4Q8WWG9 221 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 PPP1R13BQ96KQ4 1090 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 TIGD1Q96MW7 591 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 CPXM1Q96SM3 734 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 C2orf49Q9BVC5 232 aaPredicted RBP20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 HDAC8Q9BY41 377 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 OSBPL2Q9H1P3 480 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 DYRK4Q9NR20 520 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 GPR27Q9NS67 375 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 EVA1BQ9NVM1 165 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 SSUH2Q9Y2M2 353 aa20.43■□□□□ 0.86
LPCAT3-211ENST00000543794 COL6A6A6NMZ7 2263 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 KLK10O43240 276 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 SMAD6O43541 496 aaKnown RBP20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 SNAP91O60641 907 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 GRAP2O75791 330 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 CNTN5O94779 1100 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 AFPP02771 609 aaKnown RBP20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 GGCXP38435 758 aa20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 MARSP56192 900 aaKnown RBP20.42■□□□□ 0.86
LPCAT3-211ENST00000543794 HNRNPKP61978 463 aaKnown RBP eCLIP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms