RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 RIOX2Q8IUF8 465 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 MYO1HQ8N1T3 1032 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPATA13Q96N96 652 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 ACO2Q99798 780 aaKnown RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 NDUFAF1Q9Y375 327 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 TCRBV7S3A2A0A539 114 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 GLP2RO95838 553 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 TOP3BO95985 862 aaKnown RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 PGK1P00558 417 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 MAGP20916 626 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SERPINB1P30740 379 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 GRIA1P42261 906 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 KYAT3Q6YP21 454 aaKnown RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 DDI1Q8WTU0 396 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SNX15Q9NRS6 342 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 HCRTO43612 131 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 GAS2O43903 313 aaKnown RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 ABCB1P08183 1280 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 CNTFP26441 200 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SERPINB10P48595 397 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 FOLH1Q04609 750 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPRED3Q2MJR0 410 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 LACTB2Q53H82 288 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 ACSBG2Q5FVE4 666 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 UBAP2Q5T6F2 1119 aaKnown RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 TSHZ1Q6ZSZ6 1077 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 METTL6Q8TCB7 284 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 KCTD14Q9BQ13 255 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 FAM53CQ9NYF3 392 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 AP4S1Q9Y587 144 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
TUBGCP2-210ENST00000543663 FAM149AA5PLN7 773 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 STRNO43815 780 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 TMEM63AO94886 807 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 C2P06681 752 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 FMO4P31512 558 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CDKN2BP42772 138 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 PIGWQ7Z7B1 504 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 TRPC4APQ8TEL6 797 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CIB1Q99828 191 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CCNT2O60583 730 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 TGFB3P10600 412 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 MZF1P28698 734 aaPredicted RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 PNPLA4P41247 253 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 RGS4P49798 205 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 GRTP1Q5TC63 336 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CXCL17Q6UXB2 119 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 MARK2Q7KZI7 788 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 LPCAT1Q8NF37 534 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 DNAJC1Q96KC8 554 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 PPP1R10Q96QC0 940 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 C1orf50Q9BV19 199 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 MROH8Q9H579 483 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CAPN10Q9HC96 672 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SCN3BQ9NY72 215 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CORO1CQ9ULV4 474 aaPredicted RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 E7ENQ6 273 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 F9P00740 461 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 RAD51Q06609 339 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ITGADQ13349 1161 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SPDYE7PQ495Y7 208 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF484Q5JVG2 852 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 UTP15Q8TED0 518 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ASB7Q9H672 318 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 RRAGCQ9HB90 399 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 DOLKQ9UPQ8 538 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 MYRFQ9Y2G1 1151 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 RBP1P09455 135 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms