RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PPP1R12AO14974 1030 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 GALR2O43603 387 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 MFSD11O43934 449 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ADAM23O75077 832 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TJP3O95049 919 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 APBB3O95704 486 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 MT-CO1P00395 513 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 DNTTP04053 509 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 SRCP12931 536 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 COL9A1P20849 921 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 IL4RP24394 825 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 CDKN2BP42772 138 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ATP5OP48047 213 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 SERPINH1P50454 418 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 CLCN6P51797 869 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 NRLP54845 237 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 RHOAP61586 193 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 GNG11P61952 73 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 SNRPD1P62314 119 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 ARF5P84085 180 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 GBE1Q04446 702 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 RAD51Q06609 339 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 IL10RBQ08334 325 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ITKQ08881 620 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 AP1B1Q10567 949 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ZNF235Q14590 738 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 PAFAH1B3Q15102 231 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 PTPRNQ16849 979 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 MEI1Q5TIA1 1274 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TIGD7Q6NT04 549 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 C22orf39Q6P5X5 142 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 NPNTQ6UXI9 565 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 Q6ZVU0 165 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 DSG4Q86SJ6 1040 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 METTL3Q86U44 580 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 VSIG1Q86XK7 387 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 SLC35F6Q8N357 371 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 NPWQ8N729 165 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 KDM1BQ8NB78 822 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 OR2T3Q8NH03 318 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 CASKIN2Q8WXE0 1202 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 OR8D1Q8WZ84 308 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TSC1Q92574 1164 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 PRCCQ92733 491 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 FAF2Q96CS3 445 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 HES6Q96HZ4 224 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 PRRX2Q99811 253 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 GABRG3Q99928 467 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 FERMT1Q9BQL6 677 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 CINPQ9BW66 212 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 ACE2Q9BYF1 805 aaPredicted RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 OSBPL8Q9BZF1 889 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TPSD1Q9BZJ3 242 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TM6SF2Q9BZW4 377 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TNKS2Q9H2K2 1166 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 MTG2Q9H4K7 406 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 LRRC19Q9H756 370 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 DYRK4Q9NR20 520 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 HAUS2Q9NVX0 235 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 SEPT10Q9P0V9 454 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ZNF212Q9UDV6 495 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 IPO11Q9UI26 975 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 FCF1Q9Y324 198 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 HCN4Q9Y3Q4 1203 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TTLL3Q9Y4R7 772 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 OR51B4Q9Y5P0 310 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 ACTL7AQ9Y615 435 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 BDP1A6H8Y1 2624 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 C3orf70A6NLC5 250 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 USP27XA6NNY8 438 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 C1QTNF3-AMACRE9PGA6 284 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 H0Y858 1186 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 K7ERQ8 282 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 KRIT1O00522 736 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ENC1O14682 589 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 AXIN1O15169 862 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 DDX3YO15523 660 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 MAP3K13O43283 966 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 SMAD6O43541 496 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 ATP9BO43861 1147 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 CEP104O60308 925 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PRAMEF11O60813 436 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 SIN3BO75182 1162 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 TMCC1O94876 653 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 IGSF6O95976 241 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 IL1BP01584 269 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PYGMP11217 842 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 VAV1P15498 845 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 TGM2P21980 687 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 GARSP41250 739 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 PSMD8P48556 350 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 NR2C2P49116 596 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 FNTBP49356 437 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PEX5P50542 639 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 RENBPP51606 427 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 NUBP1P53384 320 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms