RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ATL1Q8WXF7 558 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 RBM4BQ9BQ04 359 aaKnown RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 RBM4Q9BWF3 364 aaKnown RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 GNB5O14775 395 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 SEMA3DO95025 777 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 HPS1Q92902 700 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 MCCC1Q96RQ3 725 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 MTMR12Q9C0I1 747 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 VPS45Q9NRW7 570 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 LOXHD1Q8IVV2 1947 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 MAP2K7O14733 419 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 MTM1Q13496 603 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 SLC47A2Q86VL8 602 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 OPTCQ9UBM4 332 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 FOLH1Q04609 750 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PLD1Q13393 1074 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 KBTBD2Q8IY47 623 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 TBC1D21Q8IYX1 336 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 LEMD2Q8NC56 503 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 TBC1D10AQ9BXI6 508 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ARMCX1Q9P291 453 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 MAPK9P45984 424 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 TRIM28Q13263 835 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 TAF13Q15543 124 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 RABL6Q3YEC7 729 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 R3HCC1LQ7Z5L2 792 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 HIPK1Q86Z02 1210 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ERMAPQ96PL5 475 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 A0A1W2PQ72 361 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 MTSS1LQ765P7 747 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 FICDQ9BVA6 458 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 MLXQ9UH92 298 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 POLR2LP62875 67 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 SWI5Q1ZZU3 235 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 HECTD3Q5T447 861 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PIWIL4Q7Z3Z4 852 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ZNF655Q8N720 491 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 NYAP2Q9P242 653 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PCDHGA10Q9Y5H3 936 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 STK25O00506 426 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PSMA1P25786 263 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 GCNT1Q02742 428 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ARHGAP36Q6ZRI8 547 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 RTKNQ9BST9 563 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PIF1Q9H611 641 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 KCNH7Q9NS40 1196 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 CLIC5Q9NZA1 410 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 DRG2P55039 364 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 MTMR2Q13614 643 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ZNF470Q6ECI4 717 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ULK3Q6PHR2 472 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 IL27RAQ6UWB1 636 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PAGE2Q7Z2X7 111 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 NT5DC3Q86UY8 548 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 GPSM1Q86YR5 675 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 BBS4Q96RK4 519 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 GMIPQ9P107 970 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PGK1P00558 417 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 FGFR3P22607 806 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 ADSLP30566 484 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PTGS2P35354 604 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 DMGDHQ9UI17 866 aaKnown RBP19.61■□□□□ 0.73
HDAC4-215ENST00000543185 GNPTGQ9UJJ9 305 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 PSME2Q9UL46 239 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 DUSP10Q9Y6W6 482 aa19.61■□□□□ 0.73
HDAC4-215ENST00000543185 SLC25A27O95847 323 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 CXCR2P25025 360 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 MFSD7Q6UXD7 560 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 CHST13Q8NET6 341 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 CCNKO75909 580 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 ITGAVP06756 1048 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 USP46P62068 366 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 SUSD4Q5VX71 490 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 RAD18Q9NS91 495 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 RP1L1Q8IWN7 2480 aaPredicted RBP19.6■□□□□ 0.73
HDAC4-215ENST00000543185 SLC26A2P50443 739 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 ADGRF2Q8IZF7 708 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 COLGALT1Q8NBJ5 622 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 BPIFB6Q8NFQ5 453 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 PI4K2AQ9BTU6 479 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 CATSPERZQ9NTU4 200 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 IL2P60568 153 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 ZNF557Q8N988 423 aaPredicted RBP19.6■□□□□ 0.73
HDAC4-215ENST00000543185 ZFP28Q8NHY6 868 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 TBL1YQ9BQ87 522 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 TDRD1Q9BXT4 1180 aaKnown RBP19.6■□□□□ 0.73
HDAC4-215ENST00000543185 TRIM2Q9C040 744 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 CARNS1A5YM72 827 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 BTNL10A8MVZ5 291 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 SNX3O60493 162 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 NUDT17P0C025 328 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 ITIH1P19827 911 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 MILR1Q7Z6M3 343 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 STAG3L4Q8TBR4 150 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 C1QTNF7Q9BXJ2 289 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 MAGEC1O60732 1142 aa19.6■□□□□ 0.73
HDAC4-215ENST00000543185 UGT1A5P35504 534 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms