RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ERVW-1Q9UQF0 538 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 HS3ST2Q9Y278 367 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 RAD54BQ9Y620 910 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 SAR1BQ9Y6B6 198 aa10.9□□□□□ -0.66
NPIPB3-210ENST00000542817 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 ARHGAP42A6NI28 874 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 RNF103O00237 685 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 DFFAO00273 331 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 MUSKO15146 869 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 ATP9BO43861 1147 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 APODP05090 189 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 DLDP09622 509 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 C7P10643 843 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 SRCP12931 536 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 TCP1P17987 556 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 PRKCHP24723 683 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 CASQ1P31415 396 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 SERPINB6P35237 376 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 IL12RB1P42701 662 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 NR2C2P49116 596 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 SERPINH1P50454 418 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 WASHC5Q12768 1159 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 GRSF1Q12849 480 aaKnown RBP eCLIP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF234Q14588 700 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 EIF4HQ15056 248 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 CYTH1Q15438 398 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 KCTD19Q17RG1 926 aaPredicted RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 SEL1L2Q5TEA6 688 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 IL31Q6EBC2 164 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 TTC27Q6P3X3 843 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 PGBD5Q8N414 524 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 SH2D3CQ8N5H7 860 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 TEX26Q8N6G2 289 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 CNTD1Q8N815 330 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 IL17RCQ8NAC3 791 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 FATE1Q969F0 183 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 ACDQ96AP0 544 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 QKIQ96PU8 341 aaKnown RBP eCLIP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 MTG2Q9H4K7 406 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 EPHX3Q9H6B9 360 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 C11orf16Q9NQ32 467 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 FBXL21Q9UKT6 434 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 DNPEPQ9ULA0 475 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 NDRG2Q9UN36 371 aaKnown RBP10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 BPTFQ12830 3046 aa10.89□□□□□ -0.67
NPIPB3-210ENST00000542817 A0A1W2PQF6 199 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 TMEM221A6NGB7 291 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 FAM170BA6NMN3 283 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 TTC34A8MYJ7 566 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 M0R296 226 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 CBX4O00257 560 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 TIMM44O43615 452 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 LIASO43766 372 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 RNF40O75150 1001 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 GJB3O75712 270 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 POLR2EP19388 210 aaKnown RBP10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 RGRP47804 291 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 CLCN6P51797 869 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 SEC13P55735 322 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 IL10RBQ08334 325 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 SLC10A7Q0GE19 358 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 ZBTB17Q13105 803 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 XRCC4Q13426 336 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 CYP1B1Q16678 543 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 C2orf27AQ580R0 203 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 LRRC49Q8IUZ0 686 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 KDM1BQ8NB78 822 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 PJA1Q8NG27 643 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 KCNV2Q8TDN2 545 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 NKD2Q969F2 451 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 IL12RB2Q99665 862 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 C2orf49Q9BVC5 232 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 OSBPL6Q9BZF3 934 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 CIPCQ9C0C6 399 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 LMAN1LQ9HAT1 526 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 DONSONQ9NYP3 566 aa10.88□□□□□ -0.67
NPIPB3-210ENST00000542817 SGK1O00141 431 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 PGRMC1O00264 195 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 MATN3O15232 486 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 TMCC1O94876 653 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ASLP04424 464 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 SRPRAP08240 638 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 HLA-EP13747 358 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 CR2P20023 1033 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 MX2P20592 715 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 COL9A1P20849 921 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 CCNCP24863 283 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 RBL1P28749 1068 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ETFBP38117 255 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 GDF10P55107 478 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 IFI35P80217 286 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 SULT2A1Q06520 285 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF33AQ06730 810 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 PDK1Q15118 436 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms