RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 STPG1Q5TH74 334 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 DCAF12L1Q5VU92 463 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 RETSATQ6NUM9 610 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 ALKBH5Q6P6C2 394 aaKnown RBP15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 LINGO4Q6UY18 593 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 Q6ZVU0 165 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 RABEPKQ7Z6M1 372 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 PSTKQ8IV42 348 aaKnown RBP15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 RTL3Q8N8U3 475 aaKnown RBP15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 OR2A12Q8NGT7 310 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 C1orf216Q8TAB5 229 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 EIF3CQ99613 913 aaKnown RBP15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 EPAS1Q99814 870 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 NCAPGQ9BPX3 1015 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 RTKNQ9BST9 563 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 C6orf106Q9H6K1 298 aaPredicted RBP15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 SARDHQ9UL12 918 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 SLC6A14Q9UN76 642 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 NCKAP1Q9Y2A7 1128 aa15.8■□□□□ 0.12
ECHDC2-223ENST00000542552 A0A1W2PP55 124 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 CDX4O14627 284 aaPredicted RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 RNF8O76064 485 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 IL1BP01584 269 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 GOT1P17174 413 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 MAOBP27338 520 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 EPHB2P29323 1055 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 MIPP30301 263 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 DRD3P35462 400 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 PCK1P35558 622 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 PSMD8P48556 350 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 SERPINH1P50454 418 aaKnown RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 TBX2Q13207 712 aaPredicted RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 CA9Q16790 459 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 ERMARDQ5T6L9 678 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 DSG4Q86SJ6 1040 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 UMODL1-AS1Q8N2C9 162 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 OR8D1Q8WZ84 308 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 SNRNP25Q9BV90 132 aaKnown RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 EDEM2Q9BV94 578 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 CEP44Q9C0F1 390 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 NEUROG2Q9H2A3 272 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 GPATCH2LQ9NWQ4 482 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 PCSK1NQ9UHG2 260 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 AP4E1Q9UPM8 1137 aa15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.79■□□□□ 0.12
ECHDC2-223ENST00000542552 ADAMTS9Q9P2N4 1935 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 SSU72P8A0A1W2PR75 194 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 MEI4A8MW99 385 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 FGF10O15520 208 aaPredicted RBP15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 CREB3O43889 395 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 RAMP2O60895 175 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 MFAP3LO75121 409 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 RNASEH2AO75792 299 aaKnown RBP15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 METAP1P53582 386 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 GALCP54803 685 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 POLD3Q15054 466 aaPredicted RBP15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 SLC18A3Q16572 532 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 CCDC122Q5T0U0 273 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 IL31Q6EBC2 164 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 C22orf39Q6P5X5 142 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 RGL4Q8IZJ4 473 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 NIPA2Q8N8Q9 360 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 ARHGEF26Q96DR7 871 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 OMDQ99983 421 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 ORAI3Q9BRQ5 295 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 NUSAP1Q9BXS6 441 aaKnown RBP15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 ABHD10Q9NUJ1 306 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 SUSD2Q9UGT4 822 aa15.78■□□□□ 0.12
ECHDC2-223ENST00000542552 KDELR3O43731 214 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 PRPSAP2O60256 369 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 IGHV4-34P06331 123 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 CTSLP07711 333 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 ENGP17813 658 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 YBEYP58557 167 aaPredicted RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 PIGHQ14442 188 aaPredicted RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 FAM46CQ5VWP2 391 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 ERMP1Q7Z2K6 904 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 PLPP6Q8IY26 295 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 HDDC3Q8N4P3 179 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 PCDH20Q8N6Y1 951 aaKnown RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 TMIEQ8NEW7 156 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 OR2T34Q8NGX1 318 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 PIP4K2CQ8TBX8 421 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 GANCQ8TET4 914 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 ISG20Q96AZ6 181 aaKnown RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 BIRC7Q96CA5 298 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 KCTD15Q96SI1 283 aaPredicted RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 NUP85Q9BW27 656 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 DHX35Q9H5Z1 703 aaKnown RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 CATSPERBQ9H7T0 1116 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 OSGEPQ9NPF4 335 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 TMEM9BQ9NQ34 198 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 EIF2B4Q9UI10 523 aaKnown RBP15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 ACTL7AQ9Y615 435 aa15.77■□□□□ 0.12
ECHDC2-223ENST00000542552 CNOT1A5YKK6 2376 aaKnown RBP15.77■□□□□ 0.11
ECHDC2-223ENST00000542552 A0A1B0GTW7 788 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms