RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 GPT2Q8TD30 523 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 SLC20A1Q8WUM9 679 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ZYG11BQ9C0D3 744 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 CEP44Q9C0F1 390 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 VPS16Q9H269 839 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ERVMER34-1Q9H9K5 563 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 FAM207AQ9NSI2 230 aaPredicted RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ANO10Q9NW15 660 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 LGALS16A8MUM7 142 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 SNAP91O60641 907 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 RTN2O75298 545 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 PRNPP04156 253 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 ZNF18P17022 549 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 STAT1P42224 750 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 NXPH1P58417 271 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 MYL5Q02045 173 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 CNTN1Q12860 1018 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 STX1AQ16623 288 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 SETMARQ53H47 684 aaPredicted RBP16■□□□□ 0.15
VPS33A-206ENST00000542310 C2CD6Q53TS8 623 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 NEK5Q6P3R8 708 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
VPS33A-206ENST00000542310 STRADAQ7RTN6 431 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 TFAP2DQ7Z6R9 452 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 FAM131BQ86XD5 332 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 PNPLA1Q8N8W4 532 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 MFSD2AQ8NA29 543 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 TMIEQ8NEW7 156 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 OR2A12Q8NGT7 310 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 MPP6Q9NZW5 540 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 ARHGAP20Q9P2F6 1191 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 FTSJ1Q9UET6 329 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
VPS33A-206ENST00000542310 SNX10Q9Y5X0 201 aa16■□□□□ 0.15
VPS33A-206ENST00000542310 ZZEF1O43149 2961 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 FAM208BQ5VWN6 2430 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 A0A0D9SEW6 157 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 TLR4O00206 839 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 EPHB6O15197 1021 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 RNGTTO60942 597 aaKnown RBP15.99■□□□□ 0.15
VPS33A-206ENST00000542310 MT-CO1P00395 513 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 CTSLP07711 333 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 EPHA8P29322 1005 aaPredicted RBP15.99■□□□□ 0.15
VPS33A-206ENST00000542310 SDC4P31431 198 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 CHRNA3P32297 505 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 ETFBP38117 255 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 PTPN9P43378 593 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 RXRGP48443 463 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 ARRB1P49407 418 aaPredicted RBP15.99■□□□□ 0.15
VPS33A-206ENST00000542310 KLK7P49862 253 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 SERPINH1P50454 418 aaKnown RBP15.99■□□□□ 0.15
VPS33A-206ENST00000542310 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
VPS33A-206ENST00000542310 SLC20A2Q08357 652 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 PIP5KL1Q5T9C9 394 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 MANEALQ5VSG8 457 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 RETSATQ6NUM9 610 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 TMPRSS7Q7RTY8 843 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 GALNT15Q8N3T1 639 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 PPP1R16AQ96I34 528 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 TMPRSS4Q9NRS4 437 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 FANCLQ9NW38 375 aa15.99■□□□□ 0.15
VPS33A-206ENST00000542310 C2CD4BA6NLJ0 364 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 KCNK3O14649 394 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 ATXN1LP0C7T5 689 aaKnown RBP15.98■□□□□ 0.15
VPS33A-206ENST00000542310 UNGP13051 313 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-206ENST00000542310 CHRNB2P17787 502 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 RRM1P23921 792 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 RECQLP46063 649 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-206ENST00000542310 NSFP46459 744 aaKnown RBP15.98■□□□□ 0.15
VPS33A-206ENST00000542310 MAPKAPK2P49137 400 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 IL9RQ01113 521 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 SHBQ15464 509 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 PCDH20Q8N6Y1 951 aaKnown RBP15.98■□□□□ 0.15
VPS33A-206ENST00000542310 EMC1Q8N766 993 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 NEK11Q8NG66 645 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 SAP25Q8TEE9 199 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 ERGIC2Q96RQ1 377 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 C11orf70Q9BRQ4 267 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 TRPM6Q9BX84 2022 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 HDAC8Q9BY41 377 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 OSBPL2Q9H1P3 480 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 ATP13A1Q9HD20 1204 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 NLRC4Q9NPP4 1024 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 DYRK4Q9NR20 520 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 PCDHGA1Q9Y5H4 931 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 DMXL2Q8TDJ6 3036 aa15.98■□□□□ 0.15
VPS33A-206ENST00000542310 SRRM3A6NNA2 597 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 K7ERQ8 282 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 PLK4O00444 970 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 KPNA3O00505 521 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 WNT9AO14904 365 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 SMAD6O43541 496 aaKnown RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 BNIP3LO60238 219 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 ZMPSTE24O75844 475 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms