RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SLC28A3Q9HAS3 691 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 ZDHHC7Q9NXF8 308 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 IGSF9Q9P2J2 1179 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 DNMT3BQ9UBC3 853 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 IPO11Q9UI26 975 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 STOML2Q9UJZ1 356 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 LSM7Q9UK45 103 aaKnown RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 TRHDEQ9UKU6 1024 aa8.87□□□□□ -0.99
THBS3-210ENST00000541576 ZFP37Q9Y6Q3 630 aaPredicted RBP8.87□□□□□ -0.99
THBS3-210ENST00000541576 ARHGAP42A6NI28 874 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TRDMT1O14717 391 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 AVILO75366 819 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 JCHAINP01591 159 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 RHOP08100 348 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TPSB2P20231 275 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 PSMB4P28070 264 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 MAGOHP61326 146 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 RPS24P62847 133 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 ZXDBP98169 803 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 PDIA2Q13087 525 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 TPSAB1Q15661 275 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ZBED8Q8IZ13 594 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 LEMD2Q8NC56 503 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 GDPD5Q8WTR4 605 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 HMCESQ96FZ2 354 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 PRICKLE1Q96MT3 831 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 SLC46A2Q9BY10 475 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 LMAN2LQ9H0V9 348 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 RETREG1Q9H6L5 497 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TLE6Q9H808 572 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TMBIM4Q9HC24 238 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 SCAMP3O14828 347 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 MATN3O15232 486 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 VIMP08670 466 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 CCNB1P14635 433 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 DDX6P26196 483 aaKnown RBP eCLIP8.86□□□□□ -0.99
THBS3-210ENST00000541576 SLCO1A2P46721 670 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 CDH4P55283 916 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 POLD3Q15054 466 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 PARP15Q460N3 678 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 GPR158Q5T848 1215 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ITPRIPL1Q6GPH6 555 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ZNF354CQ86Y25 554 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ANKMY2Q8IV38 441 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 IGDCC3Q8IVU1 814 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 AGGF1Q8N302 714 aaeCLIP8.86□□□□□ -0.99
THBS3-210ENST00000541576 TCEAL4Q96EI5 215 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ATP6V1G3Q96LB4 118 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TEKT5Q96M29 485 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 SERPINB12Q96P63 405 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 PRKD2Q9BZL6 878 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 CCDC195A0A1B0GUA6 201 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 E7ESA3 106 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 GREM1O60565 184 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 TSPAN3O60637 253 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 DIAPH2O60879 1101 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 CLDN11O75508 207 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 GRIA1P42261 906 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 SCTRP47872 440 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 EIF3BP55884 814 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 YBEYP58557 167 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 IFI35P80217 286 aaPredicted RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 BBS9Q3SYG4 887 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 ARHGAP15Q53QZ3 475 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 Q6ZNB5 142 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 CAND1Q86VP6 1230 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 MCUQ8NE86 351 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 USP33Q8TEY7 942 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 SEC16BQ96JE7 1060 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 CFAP97Q9P2B7 532 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 SH3BP1Q9Y3L3 701 aa8.86□□□□□ -0.99
THBS3-210ENST00000541576 NYNRINQ9P2P1 1898 aaKnown RBP8.86□□□□□ -0.99
THBS3-210ENST00000541576 GMNCA6NCL1 334 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 CD68P34810 354 aaPredicted RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 AVPR1AP37288 418 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 NRIP1P48552 1158 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 TEAD2Q15562 447 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 SLC5A9Q2M3M2 681 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 ANO4Q32M45 955 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 CHST9Q7L1S5 443 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 PDCD7Q8N8D1 485 aaKnown RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 ZNF419Q96HQ0 510 aaPredicted RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 TTC25Q96NG3 672 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 GBA3Q9H227 469 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 SP110Q9HB58 689 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 EIF2B3Q9NR50 452 aaKnown RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 ARHGAP26Q9UNA1 814 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 ZNF510Q9Y2H8 683 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 A0A1B0GVM2 712 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 TCAF2A6NFQ2 919 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 MOSPD3O75425 235 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 FAM107AO95990 144 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 POU2F2P09086 479 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms