RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 NAT9Q9BTE0 207 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 NMRAL1Q9HBL8 299 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 HSFX1Q9UBD0 423 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SRRDQ9UH36 339 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 AK5Q9Y6K8 562 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 TMEM114B3SHH9 223 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 KCNK1O00180 336 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 MATN2O00339 956 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 C2P06681 752 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SETSIPP0DME0 302 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 ENO3P13929 434 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SMPD1P17405 629 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 HOXD10P28358 340 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 DPP6P42658 865 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 LIMK2P53671 638 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 CDKL1Q00532 357 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 CYLC2Q14093 348 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 MYLK3Q32MK0 819 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 HSP90AA5PQ58FG0 334 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PIGGQ5H8A4 983 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SPANXN3Q5MJ09 141 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 OLFML2BQ68BL8 750 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 C16orf89Q6UX73 402 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SLC26A9Q7LBE3 791 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 CLEC14AQ86T13 490 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 ZFP28Q8NHY6 868 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 URGCPQ8TCY9 931 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 CATSPER2Q96P56 530 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 SERPINI1Q99574 410 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PKP2Q99959 881 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 NUF2Q9BZD4 464 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 ILKAPQ9H0C8 392 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 ABHD16BQ9H3Z7 469 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PRDM12Q9H4Q4 367 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 DDX18Q9NVP1 670 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 RIMS3Q9UJD0 308 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 FZD10Q9ULW2 581 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 RAB26Q9ULW5 256 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 PRPF19Q9UMS4 504 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 AKT3Q9Y243 479 aa10.73□□□□□ -0.69
PHACTR3-209ENST00000541461 ZNF236Q9UL36 1845 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 KPNA7A9QM74 516 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 GOLGA8TH3BQL2 631 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 HNRNPRO43390 633 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 HBP1O60381 514 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 FAM187BQ17R55 369 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 B3GNT6Q6ZMB0 384 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ZDHHC17Q8IUH5 632 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 AFG1LQ8WV93 481 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ISL2Q96A47 359 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 MFSD3Q96ES6 412 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 PRPF18Q99633 342 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 SMARCAD1Q9H4L7 1026 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 Q9H521 79 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 PREBQ9HCU5 417 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 VTA1Q9NP79 307 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 OXSMQ9NWU1 459 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 PTTG2Q9NZH5 202 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ZCWPW2A0A1B0GU75 182 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 TK2O00142 265 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 PDLIM1O00151 329 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 GRID2O43424 1007 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 STAU1O95793 577 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 GNRH1P01148 92 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 PENKP01210 267 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 JUNP05412 331 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ZNF865P0CJ78 1059 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 INSRRP14616 1297 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 TCN1P20061 433 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 SAT1P21673 171 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 GLUD2P49448 558 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 RPL14P50914 215 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 USP46P62068 366 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ARL13AQ5H913 290 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 CERCAMQ5T4B2 595 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 SEL1L3Q68CR1 1132 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 NXNQ6DKJ4 435 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 TICAM1Q8IUC6 712 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 FAM156AQ8NDB6 213 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 TRPV1Q8NER1 839 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 RP9Q8TA86 221 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 NFKBIZQ9BYH8 718 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 LRRC40Q9H9A6 602 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 ZDHHC2Q9UIJ5 367 aa10.72□□□□□ -0.69
PHACTR3-209ENST00000541461 CASP8AP2Q9UKL3 1982 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 A0A1B0GTW7 788 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms