RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 AUHQ13825 339 aaKnown RBP27.49■■□□□ 1.99
CHFR-218ENST00000540963 ZNF284Q2VY69 593 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 POM121L1PQ3SYA9 428 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 C5orf22Q49AR2 442 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 ABI3BPQ7Z7G0 1075 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 ZNF606Q8WXB4 792 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 SMARCE1Q969G3 411 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 GRAMD1AQ96CP6 724 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 SLC2A13Q96QE2 648 aa27.49■■□□□ 1.99
CHFR-218ENST00000540963 SCAMP1O15126 338 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 FFAR2O15552 330 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 USP12O75317 370 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 MPOP05164 745 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 KRT5P13647 590 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 NUMBP49757 651 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 OR13H1Q8NG92 308 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 OR52K2Q8NGK3 314 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 APOLD1Q96LR9 279 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 THSD1Q9NS62 852 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 TRPM6Q9BX84 2022 aa27.48■■□□□ 1.99
CHFR-218ENST00000540963 LETM1O95202 739 aaPredicted RBP27.47■■□□□ 1.99
CHFR-218ENST00000540963 PRNPP04156 253 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 PRLRP16471 622 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 CHRNA3P32297 505 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 HNRNPKP61978 463 aaKnown RBP eCLIP27.47■■□□□ 1.991e-10■■■■■ 28.3
CHFR-218ENST00000540963 KRT83P78385 493 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 CENPCQ03188 943 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 PDCLQ13371 301 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 EFHC1Q5JVL4 640 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 TMC6Q7Z403 805 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 KCNE4Q8WWG9 221 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 CALN1Q9BXU9 219 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 DYRK4Q9NR20 520 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 HOOK1Q9UJC3 728 aaKnown RBP27.47■■□□□ 1.99
CHFR-218ENST00000540963 SSUH2Q9Y2M2 353 aa27.47■■□□□ 1.99
CHFR-218ENST00000540963 HSF2BPO75031 334 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 CSO75390 466 aaKnown RBP27.46■■□□□ 1.99
CHFR-218ENST00000540963 CTSLP07711 333 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 SRCP12931 536 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 CLCN6P51797 869 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 CDH4P55283 916 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 ENOSF1Q7L5Y1 443 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 DEFB106AQ8N104 65 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 OR2A12Q8NGT7 310 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 NAF1Q96HR8 494 aaKnown RBP27.46■■□□□ 1.99
CHFR-218ENST00000540963 C2orf49Q9BVC5 232 aaPredicted RBP27.46■■□□□ 1.99
CHFR-218ENST00000540963 HDAC8Q9BY41 377 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 ABCG4Q9H172 646 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 ASCL3Q9NQ33 180 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 GPR27Q9NS67 375 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 NCKIPSDQ9NZQ3 722 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 VANGL2Q9ULK5 521 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 HS3ST3A1Q9Y663 406 aa27.46■■□□□ 1.99
CHFR-218ENST00000540963 A6NNZ2 444 aa27.45■■□□□ 1.98
CHFR-218ENST00000540963 KPNA3O00505 521 aaPredicted RBP27.45■■□□□ 1.98
CHFR-218ENST00000540963 TAF5Q15542 800 aa27.45■■□□□ 1.98
CHFR-218ENST00000540963 GCNT7Q6ZNI0 430 aa27.45■■□□□ 1.98
CHFR-218ENST00000540963 MYOCQ99972 504 aa27.45■■□□□ 1.98
CHFR-218ENST00000540963 HS3ST4Q9Y661 456 aa27.45■■□□□ 1.98
CHFR-218ENST00000540963 LY6G6EA0A0G2JKS1 128 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 THAP12O43422 761 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 BNIP3LO60238 219 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 GNA14O95837 355 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 GNA15P30679 374 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 TMEM259Q4ZIN3 620 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 ARHGAP40Q5TG30 622 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 SMYD5Q6GMV2 418 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 TTI2Q6NXR4 508 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 ERN2Q76MJ5 926 aaKnown RBP27.44■■□□□ 1.98
CHFR-218ENST00000540963 ZSCAN30Q86W11 494 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 TRIM59Q8IWR1 403 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 SLC22A18ASQ8N1D0 253 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 ATP11CQ8NB49 1132 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 KLK6Q92876 244 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 FAM81BQ96LP2 452 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 MUC3BQ9H195 1237 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 CPNE5Q9HCH3 593 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 CSNK1G3Q9Y6M4 447 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 U3KQA8 63 aa27.44■■□□□ 1.98
CHFR-218ENST00000540963 K7ESM1 405 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 IRAK1P51617 712 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 MARSP56192 900 aaKnown RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 VAC14Q08AM6 782 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 ISXQ2M1V0 245 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 ZCCHC8Q6NZY4 707 aaKnown RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 ARRDC3Q96B67 414 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 PPP1R16AQ96I34 528 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 TIGD1Q96MW7 591 aa27.43■■□□□ 1.98
CHFR-218ENST00000540963 SRRTQ9BXP5 876 aaKnown RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 INTS2Q9H0H0 1204 aaKnown RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 UBE2TQ9NPD8 197 aaPredicted RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 ZFR2Q9UPR6 939 aaKnown RBP27.43■■□□□ 1.98
CHFR-218ENST00000540963 SYNJ2BP-COX16A0A087WUM0 186 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 KLK10O43240 276 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 PCDH8O95206 1070 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 MT-CO1P00395 513 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 AFPP02771 609 aaKnown RBP27.42■■□□□ 1.98
CHFR-218ENST00000540963 KYAT3Q6YP21 454 aaKnown RBP27.42■■□□□ 1.98
CHFR-218ENST00000540963 Q6ZSR6 202 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 SETD3Q86TU7 594 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms