RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 BLACEA4D250 179 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 E9PAM4 449 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 APOC4-APOC2K7ER74 178 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 DAPK3O43293 454 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 DAB1O75553 588 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 STK10O94804 968 aaKnown RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 ABLIM3O94929 683 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PRAMEF12O95522 483 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 APOC2P02655 101 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 SYPP08247 313 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 KDELR1P24390 212 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ADORA2BP29275 332 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ATP5DP30049 168 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 MIPP30301 263 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ARL4AP40617 200 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CDKN2BP42772 138 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PTGIRP43119 386 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 MARCKSL1P49006 195 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CARSP49589 748 aaKnown RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 CLCNKBP51801 687 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 EPHA5P54756 1037 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 TAS2R40P59535 323 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ROR1Q01973 937 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 SLC25A11Q02978 314 aaKnown RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 YWHAHQ04917 246 aaPredicted RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 SOX4Q06945 474 aaPredicted RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 SLC25A52Q3SY17 297 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 KIAA1614Q5VZ46 1190 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 OVOS1Q6IE37 1185 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PMF1Q6P1K2 205 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 VSTM1Q6UX27 236 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 TMEM92Q6UXU6 159 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PPP1R21Q6ZMI0 780 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 PIGZQ86VD9 579 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 FUKQ8N0W3 1084 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CCDC33Q8N5R6 958 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ARFGAP2Q8N6H7 521 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 EXD3Q8N9H8 876 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 ZNF461Q8TAF7 563 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CASKIN2Q8WXE0 1202 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CENPIQ92674 756 aaPredicted RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 FGF11Q92914 225 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 BRD8Q9H0E9 1235 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 ZNF768Q9H5H4 540 aaKnown RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 CYP4F11Q9HBI6 524 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 POPDC2Q9HBU9 364 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 SMARCAL1Q9NZC9 954 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 CHORDC1Q9UHD1 332 aaPredicted RBP8.61□□□□□ -1.03
CHD4-208ENST00000540960 ANAPC5Q9UJX4 755 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 HPCAL4Q9UM19 191 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 BTBD3Q9Y2F9 522 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 INSL5Q9Y5Q6 135 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 NBASA2RRP1 2371 aa8.61□□□□□ -1.03
CHD4-208ENST00000540960 KNL1Q8NG31 2342 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 HMGB1P1B2RPK0 211 aaPredicted RBP8.6□□□□□ -1.03
CHD4-208ENST00000540960 H3BRJ5 948 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 PPEF2O14830 753 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 TRIM66O15016 1216 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 PAPSS1O43252 624 aaPredicted RBP8.6□□□□□ -1.03
CHD4-208ENST00000540960 LIASO43766 372 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 PPFIA2O75334 1257 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 AP1G2O75843 785 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 SEC31AO94979 1220 aaKnown RBP8.6□□□□□ -1.03
CHD4-208ENST00000540960 OAZ2O95190 189 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 CALCAP01258 141 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 IVLP07476 585 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 MYZAPP0CAP1 466 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 RARGP13631 454 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 ARSAP15289 507 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 DRD1P21728 446 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 FGFR3P22607 806 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 HOXD12P35452 270 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 GJC1P36383 396 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 ARPP19P56211 112 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 IFFO1Q0D2I5 559 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 TWF1Q12792 350 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 ORC1Q13415 861 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 XRCC4Q13426 336 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 RUNX3Q13761 415 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 MORF4L2Q15014 288 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 MDH1BQ5I0G3 518 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 INTS6LQ5JSJ4 861 aaKnown RBP8.6□□□□□ -1.03
CHD4-208ENST00000540960 ERMARDQ5T6L9 678 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 DENND2CQ68D51 928 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 FAM171BQ6P995 826 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 ATG14Q6ZNE5 492 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 PHLDB2Q86SQ0 1253 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 RFX6Q8HWS3 928 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 SPATA2LQ8IUW3 424 aaPredicted RBP8.6□□□□□ -1.03
CHD4-208ENST00000540960 SLC41A1Q8IVJ1 513 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 TCEAL8Q8IYN2 117 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 BPIFB1Q8TDL5 484 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 FAM172AQ8WUF8 416 aa8.6□□□□□ -1.03
CHD4-208ENST00000540960 P3H4Q92791 437 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms