RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TACC1O75410 805 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 DNTTP04053 509 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 MPOP05164 745 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 TMEM191BP0C7N4 346 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SFTPCP11686 197 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KRT10P13645 584 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ITIH2P19823 946 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CR2P20023 1033 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 PRKCHP24723 683 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CD38P28907 300 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ATP5C1P36542 298 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SLC5A3P53794 718 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 INHBCP55103 352 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 NXPH1P58417 271 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 GUCY1B3Q02153 619 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ST3GAL1Q11201 340 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 IL17AQ16552 155 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ME3Q16798 604 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ARL13BQ3SXY8 428 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CYP27C1Q4G0S4 372 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CDCP2Q5VXM1 449 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KIAA1614Q5VZ46 1190 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KLHDC10Q6PID8 442 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SERPINA13PQ6UXR4 307 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KANSL1Q7Z3B3 1105 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ANKS1BQ7Z6G8 1248 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 GPBP1Q86WP2 473 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CACUL1Q86Y37 369 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 RBBP8NLQ8NC74 664 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SCAMP5Q8TAC9 235 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 GOLGA1Q92805 767 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 HVCN1Q96D96 273 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 HPDLQ96IR7 371 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 PIWIL1Q96J94 861 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CDK5RAP3Q96JB5 506 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 C8orf76Q96K31 380 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SLC6A18Q96N87 628 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SEMA3CQ99985 751 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 B3GNT5Q9BYG0 378 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 MTMR12Q9C0I1 747 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SNX25Q9H3E2 840 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ASCL3Q9NQ33 180 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 RBAKQ9NYW8 714 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ZC3H7BQ9UGR2 993 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CENPEQ02224 2701 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ITPR2Q14571 2701 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF638Q14966 1978 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SPTBN1Q01082 2364 aaKnown RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 DENND4CQ5VZ89 1909 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SCN1AP35498 2009 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CLEC18AA5D8T8 446 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 C10orf142B7Z368 130 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TLR4O00206 839 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CLDN5O00501 218 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 OPA1O60313 960 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 USP12O75317 370 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CBX7O95931 251 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TBX18O95935 607 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 WNT1P04628 370 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ITGB6P18564 788 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ATF4P18848 351 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 RBMS1P29558 406 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 DNAJA1P31689 397 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CHKAP35790 457 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CCR10P46092 362 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TOB1P50616 345 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 RPS14P62263 151 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ARID5AQ03989 594 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 BNIP3Q12983 259 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 GNL2Q13823 731 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 LINC00303Q3SY05 128 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TTC31Q49AM3 519 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SLC45A4Q5BKX6 768 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 FYB2Q5VWT5 728 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CLEC18BQ6UXF7 455 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 USP30Q70CQ3 517 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 NLRC3Q7RTR2 1065 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF720Q7Z2F6 126 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SKAP1Q86WV1 359 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CLEC18CQ8NCF0 446 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 B3GALNT2Q8NCR0 500 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 FBXO18Q8NFZ0 1043 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 OR6B3Q8NGW1 331 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 DNAJB8Q8NHS0 232 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CYB5D2Q8WUJ1 264 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SORCS1Q8WY21 1168 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 GRAMD1AQ96CP6 724 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SAAL1Q96ER3 474 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms