RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
UBC-208ENST00000540700 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
UBC-208ENST00000540700 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
UBC-208ENST00000540700 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 GIPC1O14908 333 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 FGF10O15520 208 aaPredicted RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 RHOCP08134 193 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 KRT10P13645 584 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 OR1E1P30953 314 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 ARL4AP40617 200 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 GRIA2P42262 883 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 CTSOP43234 321 aaPredicted RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 MAPKAPK2P49137 400 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 NOVA1P51513 510 aaKnown RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 ZNF211Q13398 564 aaPredicted RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 PLEKHG6Q3KR16 790 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 HS1BP3Q53T59 392 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 PITRM1Q5JRX3 1037 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 PLA2G2CQ5R387 149 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 ZFYVE27Q5T4F4 411 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 RNF219Q5W0B1 726 aaPredicted RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 CCDC33Q8N5R6 958 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 TRIM58Q8NG06 486 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 LRRC19Q9H756 370 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 CATSPERBQ9H7T0 1116 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 VPS45Q9NRW7 570 aa17.1■□□□□ 0.33
UBC-208ENST00000540700 KIAA1522Q9P206 1035 aaPredicted RBP17.1■□□□□ 0.33
UBC-208ENST00000540700 DSPP15924 2871 aaKnown RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 hCG_1818297A0A087WSY0 165 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 ENC1O14682 589 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 MFSD11O43934 449 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 SNAP91O60641 907 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 APODP05090 189 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 SEC13P55735 322 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 SETD3Q86TU7 594 aaPredicted RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 EXD1Q8NHP7 514 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ARHGEF2Q92974 986 aaKnown RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 HMCESQ96FZ2 354 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 WDR24Q96S15 920 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 FEM1AQ9BSK4 669 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 SLC39A8Q9C0K1 460 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ACTL7AQ9Y615 435 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 MUC22E2RYF6 1773 aaPredicted RBP17.09■□□□□ 0.33
UBC-208ENST00000540700 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
UBC-208ENST00000540700 ILVBLA1L0T0 632 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 C4orf47A7E2U8 309 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 MIF4GDA9UHW6 222 aaKnown RBP17.08■□□□□ 0.32
UBC-208ENST00000540700 ZNF487B1APH4 448 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 RASA4BC9J798 803 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 DAPK3O43293 454 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 RASA4O43374 803 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.326e-9■■■■□ 20.1
UBC-208ENST00000540700 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.32
UBC-208ENST00000540700 DRD1P21728 446 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 KIR2DL1P43626 348 aaPredicted RBP17.08■□□□□ 0.32
UBC-208ENST00000540700 PLK1P53350 603 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 RWDD2BP57060 319 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 AMPD2Q01433 879 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 GNA12Q03113 381 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 GBE1Q04446 702 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 SLC10A2Q12908 348 aaPredicted RBP17.08■□□□□ 0.32
UBC-208ENST00000540700 PTPRNQ16849 979 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 C6orf118Q5T5N4 469 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 EGFLAMQ63HQ2 1017 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 MBLAC2Q68D91 279 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 SLC9A4Q6AI14 798 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 NPNTQ6UXI9 565 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 VSIG1Q86XK7 387 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 AHI1Q8N157 1196 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 UMODL1-AS1Q8N2C9 162 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 LRRN4Q8WUT4 740 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 TTC17Q96AE7 1141 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 MYO19Q96H55 970 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 MRGPRX3Q96LB0 322 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 ACOX2Q99424 681 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 EDEM2Q9BV94 578 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 ACE2Q9BYF1 805 aaPredicted RBP17.08■□□□□ 0.32
UBC-208ENST00000540700 PCDHGA5Q9Y5G8 931 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 SPAG17Q6Q759 2223 aa17.08■□□□□ 0.32
UBC-208ENST00000540700 RAMP2O60895 175 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 RNF40O75150 1001 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 ZMPSTE24O75844 475 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 CD160O95971 181 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 ARF5P84085 180 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 CREB5Q02930 508 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 GRSF1Q12849 480 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBC-208ENST00000540700 PAFAH1B3Q15102 231 aaKnown RBP17.07■□□□□ 0.32
UBC-208ENST00000540700 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms