RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 IL4RP24394 825 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CD151P48509 253 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ST3GAL1Q11201 340 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TBRG1Q3YBR2 411 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CLIP4Q8N3C7 705 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ZNF655Q8N720 491 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 BLOC1S5Q8TDH9 187 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 GATAD2BQ8WXI9 593 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ART4Q93070 314 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 REXO5Q96IC2 774 aaKnown RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 C8orf48Q96LL4 319 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SPON1Q9HCB6 807 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PSME2Q9UL46 239 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PCDHA6Q9UN73 950 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PCDHA8Q9Y5H6 950 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CPDO75976 1380 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ZNF99A8MXY4 864 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 B8ZZF3 427 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ITM2AO43736 263 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 UGT2B11O75310 529 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 AP2A2O94973 939 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 RLN1P04808 185 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CHRNB1P11230 501 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MSR1P21757 451 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 STAT3P40763 770 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CENPAP49450 140 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 AP3B2Q13367 1082 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 WSCD2Q2TBF2 565 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PEG10Q86TG7 708 aaKnown RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 METTL23Q86XA0 190 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 DNAAF5Q86Y56 855 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 AADATQ8N5Z0 425 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MCOLN3Q8TDD5 553 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TBCDQ9BTW9 1192 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 BARHL2Q9NY43 387 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 UBQLN2Q9UHD9 624 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 GCC2Q8IWJ2 1684 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 LRRC14BA6NHZ5 514 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 GH1P01241 217 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 GPC3P51654 580 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SPOCD1Q6ZMY3 1216 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CBR4Q8N4T8 237 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SPERTQ8NA61 448 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 OR7G1Q8NGA0 311 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 GPRASP2Q96D09 838 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 FAM20AQ96MK3 541 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 INPP4AQ96PE3 977 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 S100A13Q99584 98 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ADI1Q9BV57 179 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MAN1C1Q9NR34 630 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SLC30A1Q9Y6M5 507 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PGRMC2O15173 223 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 ZNF432O94892 652 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 NPPAP01160 153 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 IL7P13232 177 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 NPY2RP49146 381 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MADCAM1Q13477 382 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CSHL1Q14406 222 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PSMD5Q16401 504 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CLEC16AQ2KHT3 1053 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 R3HCC1LQ7Z5L2 792 aaKnown RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 TRABD2AQ86V40 505 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TBC1D19Q8N5T2 526 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CDYL2Q8N8U2 506 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 DPY30Q9C005 99 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 INVSQ9Y283 1065 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 AP3M1Q9Y2T2 418 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 TDP2O95551 362 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 MYBP10242 640 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 RPS3P23396 243 aaKnown RBP eCLIP8.87□□□□□ -0.99
YBX3-208ENST00000540447 MYL9P24844 172 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 RPS9P46781 194 aaKnown RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 CEBPGP53567 150 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 UAP1L1Q3KQV9 507 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 CERKLQ49MI3 558 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 PTPN20Q4JDL3 420 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SLC44A2Q8IWA5 706 aaPredicted RBP8.87□□□□□ -0.99
YBX3-208ENST00000540447 TBC1D16Q8TBP0 767 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 NACC2Q96BF6 587 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PHOX2BQ99453 314 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 COQ10BQ9H8M1 238 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 SPASTQ9UBP0 616 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PCYOX1Q9UHG3 505 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 PDE10AQ9Y233 779 aa8.87□□□□□ -0.99
YBX3-208ENST00000540447 USP17L3A6NCW0 530 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 USP17L4A6NCW7 530 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 FABP12A6NFH5 140 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 EFCAB9A8MZ26 197 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 SULT1B1O43704 296 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 VPS4BO75351 444 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 CD4P01730 458 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 CD2P06729 351 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 PABPC4LP0CB38 370 aaKnown RBP8.86□□□□□ -0.99
YBX3-208ENST00000540447 CYP4B1P13584 511 aa8.86□□□□□ -0.99
YBX3-208ENST00000540447 CNTN1Q12860 1018 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms