RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 H0Y858 1186 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CBX4O00257 560 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 DAPK3O43293 454 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 RASA4O43374 803 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 WIPF1O43516 503 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 KRT86O43790 486 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 ATP9BO43861 1147 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 MFSD11O43934 449 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 APBB3O95704 486 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CD160O95971 181 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 MT-CO1P00395 513 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 EPHX1P07099 455 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 SRCP12931 536 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 GABRG2P18507 467 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 NDUFV2P19404 249 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 AMPD1P23109 780 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 KDELR1P24390 212 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CTNNA1P35221 906 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PXNP49023 591 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 SERPINH1P50454 418 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 NDST2P52849 883 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 COPAP53621 1224 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 NAP1L1P55209 391 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 YBEYP58557 167 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CSTF1Q05048 431 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CCDC173Q0VFZ6 552 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 SERINC3Q13530 473 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 STARD3Q14849 445 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 POLD3Q15054 466 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 HNRNPA1L2Q32P51 320 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 ANKRD20A8PQ5CZ79 823 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 NCBP2-AS2Q69YL0 99 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 IL31Q6EBC2 164 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 ANO7Q6IWH7 933 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 TMCO3Q6UWJ1 677 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 LINGO4Q6UY18 593 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 NT5DC3Q86UY8 548 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 MAP7D3Q8IWC1 876 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 TP53INP2Q8IXH6 220 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 KATNAL2Q8IYT4 538 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 RNF10Q8N5U6 811 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 LZTR1Q8N653 840 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PQLC3Q8N755 202 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 KCTD6Q8NC69 237 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 ZBTB44Q8NCP5 570 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 FRS2Q8WU20 508 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 RAPGEF5Q92565 580 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 KRT35Q92764 455 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 HMCESQ96FZ2 354 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 CELF6Q96J87 481 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 FAM126AQ9BYI3 521 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 MTG2Q9H4K7 406 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PDFQ9HBH1 243 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 POLMQ9NP87 494 aaPredicted RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 DDX56Q9NY93 547 aaKnown RBP7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 DONSONQ9NYP3 566 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 EBF1Q9UH73 591 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 SLCO3A1Q9UIG8 710 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PPP2R2CQ9Y2T4 447 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 PLXNA2O75051 1894 aa7.13□□□□□ -1.27
LPCAT3-209ENST00000540060 THADAQ6YHU6 1953 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 CCDC163A0A0D9SF12 145 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 EDDM13A0A1B0GTR0 161 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 CCDC66A2RUB6 948 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ARHGAP42A6NI28 874 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 K7ERQ8 282 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SMAD6O43541 496 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 KDELR3O43731 214 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SYNCRIPO60506 623 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 LILRB5O75023 590 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SIN3BO75182 1162 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ZNF821O75541 412 aaPredicted RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PALMO75781 387 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ALDH1A2O94788 518 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 FTCDO95954 541 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 TNNT1P13805 278 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 VAV1P15498 845 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 CTNNA2P26232 953 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SERPINB6P35237 376 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 NNMTP40261 264 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 CDKN2BP42772 138 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 FNTBP49356 437 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 NRLP54845 237 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 GEMIN4P57678 1058 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 PAFAH1B3Q15102 231 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 TAZQ16635 292 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ZFYVE27Q5T4F4 411 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 C9orf64Q5T6V5 341 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 HEATR6Q6AI08 1181 aaKnown RBP7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 SLC9A4Q6AI14 798 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 RETSATQ6NUM9 610 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 C22orf39Q6P5X5 142 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 MFSD7Q6UXD7 560 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 ARHGAP36Q6ZRI8 547 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 Q6ZVU0 165 aa7.12□□□□□ -1.27
LPCAT3-209ENST00000540060 WDR5BQ86VZ2 330 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms