RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 THUMPD3Q9BV44 507 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RAB6CQ9H0N0 254 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ACSS3Q9H6R3 686 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NMRK1Q9NWW6 199 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 EFR3BQ9Y2G0 817 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NFS1Q9Y697 457 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 H0Y626 953 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 MAN1A2O60476 641 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 TRIM16O95361 564 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 NPR3P17342 541 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 CCDC142Q17RM4 750 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 GPR141Q7Z602 305 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 SPATA2LQ8IUW3 424 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 MICU2Q8IYU8 434 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 DEFB106AQ8N104 65 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 GSTCDQ8NEC7 633 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 SEPHS2Q99611 448 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 LRMDAQ9H2I8 198 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 DENND2DQ9H6A0 471 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 CACYBPQ9HB71 228 aaKnown RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 KCNK4Q9NYG8 393 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 CD274Q9NZQ7 290 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 PRR5-ARHGAP8B1AHC4 643 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 RNF103O00237 685 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 NR5A2O00482 541 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 ALOX15BO15296 676 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 LYPLA1O75608 230 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 FAM155BO75949 473 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 VAPBO95292 243 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 FKBP9O95302 570 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 PARNO95453 639 aaKnown RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 ARHGAP8P85298 464 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 PPIDQ08752 370 aaKnown RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 CCDC85BQ15834 202 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 FKBP9P1Q75LS8 142 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 PTAR1Q7Z6K3 402 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 CMASQ8NFW8 434 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 BHMTQ93088 406 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 NKD2Q969F2 451 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-202ENST00000540010 PEBP4Q96S96 227 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 TBCBQ99426 244 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 DUSP16Q9BY84 665 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 GPAMQ9HCL2 828 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 GID8Q9NWU2 228 aa10.15□□□□□ -0.78
TRAF1-202ENST00000540010 AP3B1O00203 1094 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 PIGNO95427 931 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 FAM58BPP0C7Q3 252 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 WARSP23381 471 aaKnown RBP10.15□□□□□ -0.79
TRAF1-202ENST00000540010 PSMA4P25789 261 aaKnown RBP10.15□□□□□ -0.79
TRAF1-202ENST00000540010 TRPC1P48995 793 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 GSCP56915 257 aaPredicted RBP10.15□□□□□ -0.79
TRAF1-202ENST00000540010 GALNTL6Q49A17 601 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 AGAP9Q5VTM2 703 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 GLB1LQ6UWU2 654 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 MIB1Q86YT6 1006 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 ECSITQ9BQ95 431 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 NRDE2Q9H7Z3 1164 aa10.15□□□□□ -0.79
TRAF1-202ENST00000540010 ERI2A8K979 691 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TPP1O14773 563 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 MTSS1O43312 755 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 BAIAP3O94812 1187 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 HSPA1AP0DMV8 641 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 HSPA1BP0DMV9 641 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 YWHAZP63104 245 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TWF1Q12792 350 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 GTF2H3Q13889 308 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 C16orf72Q14CZ0 275 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 MFSD5Q6N075 450 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 DRICH1Q6PGQ1 229 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 LPCAT2Q7L5N7 544 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ADCK1Q86TW2 530 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 KIAA2013Q8IYS2 634 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF555Q8NEP9 628 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 CALML6Q8TD86 181 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 RNF157Q96PX1 679 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 PPP1R10Q96QC0 940 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 STARD7Q9NQZ5 370 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ETNK2Q9NVF9 386 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 SRRDQ9UH36 339 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 GSC2O15499 205 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ZSCAN9O15535 394 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 APOA4P06727 396 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ME2P23368 584 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 LRPAP1P30533 357 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 RABGGTBP53611 331 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 ATXN1P54253 815 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 WLSQ5T9L3 541 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 SLC26A9Q7LBE3 791 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 DDI1Q8WTU0 396 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 GFM2Q969S9 779 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 HNRNPABQ99729 332 aaKnown RBP10.14□□□□□ -0.79
TRAF1-202ENST00000540010 UBDO15205 165 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 MGRN1O60291 552 aa10.14□□□□□ -0.79
TRAF1-202ENST00000540010 CABYRO75952 493 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms